Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02446 ATGTCTATGTACGCTGTTAGGGAAAAGGTTAAAAGACATTGGAAGAATCTAGAGCCTTTGTTTTCAGAGGTTAAATCAGTAATATCAGAGAGGGAGTGTTTGGGTAGTGAGGAGAATACCAATATTCTATCTTCAAGAATTCGAAGTCCATTCTATAAGCACATTAGTTCCCCTAACAGTATTTCAGATAACGACGAAATCAGCAACGAGGACTTTTCAATTGCAAAAAGCATTAAGATTCCATACGTGGAAAAACTACCCTCGTATACATCTTGGGTTTATGTGCCTAGAAATGAGAAAATGGCTGAAGATCAATCAATTATTGGTAAGCCACAAATGTACTGTGATATAAATAAAGGTGAAATGGTTATATGCAGTGACAGTGAGGAAGAGACGATAAATCTTGAAGATGTTAAACATCACTTCACTGAGGCTGAAGACCAAATTCTGTGGAAGACACTTCATGAATATGGATCAAATGAAAACGTACTGAGTATCATTAAAGAGTTTGTTAAGACTACTGTTTCACAAATCCAGGAGAGGTTTGAAAAACTCAAGGAAATTAAAATGGAAAGTCTAAACAAGCTTTCTAAAGATTGTCACTGTAGTGGATGTGAATCTCATCTTGGGATATGTTTGGAGAAAGGGTTGAGTGCAAGTTTAGGGTCTTTCGATAACCTTTTTTGTCGTCAATGCTTGATCTTTAATTGTTCTATGCATGGCGCTTCTCAACCTTTAATATATCCTACAGAAAAGCAACAATTTTGGTCTGAAAATGAAGGTGACAGACAACCATGTAGTGATCAATGTGCCCTTCTGTTAAAGAATGTGAGGCTTTCTTTAGAAAATTCAGCTGAAGGGTCCTCTAAAGCCAAAAGAGTTAATCCAACAAAAGAGAACTCAACATTGCCTCCTAAAGAGTCTCTGGATTCTTGTAATAAGCTGAAGACAATCTTAGAAGATACAGTCATCAATATTGACAATCACAACAAGGAACTAAATTTGGATGTTAGCAGTGAAGGAAAATGCGCAATGTATCATGAATCTTGTAGAAGTCTTGATGAACATACTTCCAAAATAGCAGTTTCTGGTAGTTCTAACCATGGTGAACGAGACGAGGAGGTTGTGGAAGGTCAAAAAGACATCCAACTGTCCAATTCAACGGAACTGCATGCTAAGGAGATAACAAGTAAACTGGATTGGAAACCTCTTGAAAGAGATTTATATTTGAAGGGAGTAGAAGTGTTTGGAAAAAACAGTTGTCTTATTGCTCGTAACTTACTTCCTGGATTGAAGAACTGCTCGGAAGTAGATAGGTACATGTTTGCTGAGGAGGAGTCAATGCTCCATGGATCCATGCCACTTTCAATTGCAAATAACAATGATCACACTGATGCAGAGAGCACGGAGGAAGAGACGCCATCAAGATCACAGTTGCAGCGGAAAAAGGGAAAATATTCTCGAAAATCAGTTGGCCTCTCACCTAGATGGAGAAAAAAGGGTGATGGAAAAAAACGAAGTAATACGCAGTATACTCCTTGTAGGTGTCAAGGAATATGCACAAAGGAATGCACTTGTCATCGTGATGATATTCGTTGTGAAAAATATTGTGGGTGTTCAAAGTTTTGCCGTAATCGGTTCAGAGGATGTTATTGTGCTAAGAATCAATGCAGAAGTAAACAATGTCCATGCTTTGCAATCAACCGTGAATGTGACCCAGATATTTGTCGAAATTGTTGGGTTAGTTGCAAAGATAGTTCATCGAGGGAGCTATCCGGAGAACTATCAAGGAAGCTACCTGAAGGTGGATATGATCAATGTGATAATATGAATCTTCTTTTAGGTAAAAAAGAGAGGATTCTTTTAGCAAAGTCAAATGTTGTTGGATGGGGAGTCTTCGCAAAGAATCCAATTAAGAAAGATGCTTGTCTCGGAGAGTACACAGGTGAACTAATCACTCACAAAGAAGCAGAAAAACGTGGAAAACTATATAATCAAATGAACCATTCGTTCCTTTTTGACCTCAATAATAAGTGGGTTATTGATGATCGTCGATATGGAGACAAATTAAAATTTGCAAATCACTCATCAAAAACCAATTGTTATGCAAAGGTGATGTTTGTTGGAGGAGATCATCGAGTTGGCATATATGCCAAGGAGAACATAAAAGTTGGCGAAGAGATTTTATATGATTATTTCTATAAAAAAGAATGTGCACCATTATGGGCTCGTCCATCTAATGATGAGGCTTCTAAGGAACATGGATCAACTCTTTCTCAATCCAAGACAAAGGTTAATCAACGTAAGGAAAGGACTCAAGGTATTTTGACTAGGAAATTTCATTGTGATACTAATATCAAATGCTAA 2367 0.3743 MSMYAVREKVKRHWKNLEPLFSEVKSVISERECLGSEENTNILSSRIRSPFYKHISSPNSISDNDEISNEDFSIAKSIKIPYVEKLPSYTSWVYVPRNEKMAEDQSIIGKPQMYCDINKGEMVICSDSEEETINLEDVKHHFTEAEDQILWKTLHEYGSNENVLSIIKEFVKTTVSQIQERFEKLKEIKMESLNKLSKDCHCSGCESHLGICLEKGLSASLGSFDNLFCRQCLIFNCSMHGASQPLIYPTEKQQFWSENEGDRQPCSDQCALLLKNVRLSLENSAEGSSKAKRVNPTKENSTLPPKESLDSCNKLKTILEDTVINIDNHNKELNLDVSSEGKCAMYHESCRSLDEHTSKIAVSGSSNHGERDEEVVEGQKDIQLSNSTELHAKEITSKLDWKPLERDLYLKGVEVFGKNSCLIARNLLPGLKNCSEVDRYMFAEEESMLHGSMPLSIANNNDHTDAESTEEETPSRSQLQRKKGKYSRKSVGLSPRWRKKGDGKKRSNTQYTPCRCQGICTKECTCHRDDIRCEKYCGCSKFCRNRFRGCYCAKNQCRSKQCPCFAINRECDPDICRNCWVSCKDSSSRELSGELSRKLPEGGYDQCDNMNLLLGKKERILLAKSNVVGWGVFAKNPIKKDACLGEYTGELITHKEAEKRGKLYNQMNHSFLFDLNNKWVIDDRRYGDKLKFANHSSKTNCYAKVMFVGGDHRVGIYAKENIKVGEEILYDYFYKKECAPLWARPSNDEASKEHGSTLSQSKTKVNQRKERTQGILTRKFHCDTNIKC 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02446 788 Gene3D SET domain 511 734 IPR046341 -
Phco2g02446 788 MobiDBLite consensus disorder prediction 481 503 - -
Phco2g02446 788 MobiDBLite consensus disorder prediction 285 308 - -
Phco2g02446 788 Pfam CXC domain 549 580 IPR041355 -
Phco2g02446 788 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 6 779 IPR025778 GO:0031519
Phco2g02446 788 ProSiteProfiles CXC domain profile. 494 596 IPR026489 -
Phco2g02446 788 Pfam SET domain 629 732 IPR001214 GO:0005515
Phco2g02446 788 MobiDBLite consensus disorder prediction 453 509 - -
Phco2g02446 788 SMART set_7 618 739 IPR001214 GO:0005515
Phco2g02446 788 SUPERFAMILY SET domain 506 734 IPR046341 -
Phco2g02446 788 ProSiteProfiles SET domain profile. 618 733 IPR001214 GO:0005515
Phco2g02446 788 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 7 756 IPR045318 GO:0006338|GO:0042054
Phco2g02446 788 MobiDBLite consensus disorder prediction 746 771 - -
Phco2g02446 788 CDD SET_EZH 618 734 - -
Phco2g02446 788 MobiDBLite consensus disorder prediction 464 479 - -
Phco2g02446 788 SMART CXC_2 545 582 IPR033467 -
Phco2g02446 788 FunFam Putative histone-lysine N-methyltransferase EZH2 511 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02446 Phco-Chr2 54532532 54545442 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phco2g02446 SET 5.4e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02446 2 54532532 54545442 Phco2g02446 2 54532532 54545442 ECH
Phco2g02446 2 54532532 54545442 Phco6g01456 6 15082873 15096347 PCT