Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phco2g02441 | ATGGCATCGATTCAACGTTCGGCGACAAGTTCTGGATCTGAAGCAGGAGATCTGCAAATCGACGAGAGAAAGCGGAAGAGGATGTTGTCGAACCGCGAATCCGCGCGGCGATCGCGGATGAGGAAGCAGAAACAGCTGGAGGATTTGACCGATGAAGTTAGCAGATTGCAAGGCGCGAACAAGAAGCTTGTGGAGAACATAACGGCCAAGGAAGAAGCGTGCGCTGAGACCGAAGCCGCGAACAGTATTTTGAGGGTTCAGACCATGGAACTGACGGAACGATTACGCTTCTTGAACTCTATCCTTGAAATCGCTGAAGAGGTCGGAGGTTTATCCGTTGAGATTCCCGATATTCCAGATCCTCTCCTCAAGCCATGGCAGATTCCTCATCCGACGCAAGCGATTATGGCCACCGCAAATATGTTTCTGCGTTGA | 435 | 0.5103 | MASIQRSATSSGSEAGDLQIDERKRKRMLSNRESARRSRMRKQKQLEDLTDEVSRLQGANKKLVENITAKEEACAETEAANSILRVQTMELTERLRFLNSILEIAEEVGGLSVEIPDIPDPLLKPWQIPHPTQAIMATANMFLR | 144 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phco2g02441 | 144 | SUPERFAMILY | Leucine zipper domain | 23 | 71 | IPR046347 | GO:0003700|GO:0006355 | |
Phco2g02441 | 144 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Phco2g02441 | 144 | FunFam | BZIP transcription factor | 21 | 72 | - | - | |
Phco2g02441 | 144 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 26 | 41 | IPR004827 | GO:0003700|GO:0006355 | |
Phco2g02441 | 144 | PANTHER | BZIP TRANSCRIPTION FACTOR 44 | 5 | 128 | - | - | |
Phco2g02441 | 144 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 21 | 67 | IPR004827 | GO:0003700|GO:0006355 | |
Phco2g02441 | 144 | SMART | brlzneu | 19 | 83 | IPR004827 | GO:0003700|GO:0006355 | |
Phco2g02441 | 144 | Coils | Coil | 32 | 80 | - | - | |
Phco2g02441 | 144 | MobiDBLite | consensus disorder prediction | 17 | 52 | - | - | |
Phco2g02441 | 144 | Pfam | bZIP transcription factor | 23 | 76 | IPR004827 | GO:0003700|GO:0006355 | |
Phco2g02441 | 144 | CDD | bZIP_plant_GBF1 | 24 | 68 | IPR045314 | GO:0003700|GO:0006355 | |
Phco2g02441 | 144 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Phco2g02441 | 144 | Gene3D | - | 21 | 77 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phco2g02441 | Phco-Chr2 | 54503809 | 54504243 | Proximal |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Phco2g02441 | bZIP_1 | 9.4e-12 | CL0018 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phco2g02441 | 2 | 54503809 | 54504243 | Phco2g02441 | 2 | 54503809 | 54504243 | ECH | |
Phco2g02441 | 2 | 54503809 | 54504243 | Phco6g01463 | 6 | 15158330 | 15158988 | PCT |