Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02424 ATGCGAACAAAGAACACGCGCGTTCTAGTGGCCGACATCAATCTCGTCTTCTTTTGGATATACATAGGCAGCAGAGATAAGAAGAGTTTGAATGCATTGACAGAGAAAAGAAAGATGTCTGATAATCACAAGACTCAGAGTTCGGCACCCAAACTGTTTGGTTTCCCACTAACAGAGCTTGAGGAATTTGCAGAAAGGAAATTCGATGTTGGAGAGGACAGAAAATTCAGGTGCCACTACTGCAAGCGAGTTTTTGCAAACTCCCAGGCCTTAGGGGGCCACCAAAACGCTCACAAGAAAGAGCGTCAGAGAGCCAGGCGATTCCAAATCCACAACCACAGACGCTCCTCCGTGCCACCGTCATCTGTTTCAGTTCCGCCTCTTACCTTTCTCACCTCCCATGCAATGATACGATCAGTGCCACTTTCTTTTACACTGCCACCCATTTGCCTTCCCTCTCCTTCTCCTTCTACCACCGCAAAACACTTCCCCTCGCGCCCTGTTTTCGTTCCTTCATCCCCTCGTCCCACTACTACTACTTCTACTACTCCATGTTTTCCTTTTCAGCTTTATGCCTCACCCACTGTACTGCAATCTGCTTCTACTGTCTTTGATTTTTCTGCAGACAGGGAAGTTGATGTCCATCTCAAATTGTAG 657 0.4718 MRTKNTRVLVADINLVFFWIYIGSRDKKSLNALTEKRKMSDNHKTQSSAPKLFGFPLTELEEFAERKFDVGEDRKFRCHYCKRVFANSQALGGHQNAHKKERQRARRFQIHNHRRSSVPPSSVSVPPLTFLTSHAMIRSVPLSFTLPPICLPSPSPSTTAKHFPSRPVFVPSSPRPTTTTSTTPCFPFQLYASPTVLQSASTVFDFSADREVDVHLKL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02424 218 Gene3D Classic Zinc Finger 63 122 - -
Phco2g02424 218 SUPERFAMILY beta-beta-alpha zinc fingers 73 103 IPR036236 -
Phco2g02424 218 ProSitePatterns Zinc finger C2H2 type domain signature. 78 98 IPR013087 -
Phco2g02424 218 FunFam Zinc finger protein 6 64 136 - -
Phco2g02424 218 Pfam C2H2-type zinc finger 76 101 - -
Phco2g02424 218 MobiDBLite consensus disorder prediction 157 176 - -
Phco2g02424 218 PANTHER ZINC FINGER PROTEIN 5 40 218 IPR044299 GO:0010090
Phco2g02424 218 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02424 Phco-Chr2 54373850 54377448 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco2g02424 zf-C2H2_6 2.8e-05 CL0361