Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02351 ATGTCGTGTGTGGTGGTGAAGACGAAGATGAAGGGGAAAAGCCACAAGATTGGAAAGAAGCAGAGTAGGAAGATGAAGGGCGCGTTGTGTAACAGCAACACCAGGCAGTTGCAGCTTCAGCTAGGTCAAGTTTCCCTCATTCCTCTCAACCAACCATCTTCTACCACTTCTTCCTCCGTTTCTTGCTTCCAGAACCCTCTCGATTCCGAACCTCCCAACACGTCCTCATCGCGCGTTGTGCTCACCGCCGATGCTGTCGCTGACGACAGAGACGGTATTCTCAGCCAGGACTTCTTCTGCACTCCGGATTACATTACTCCGGATAATCAGAATATTTTTAATGGCTTTGATTGCGATAGGGATGATACTCCCTGCCCCAAATCGCCTGAGAAGCTTACCAGTACGAAGAGCAAGAGATGCCGACTAGATGCTATGTCGGTTCAACCTCTCAGCCCCACCTTTTCTAGTGACCATCAGCCAGCCGTGGAATTGGGAAAGGATTCTGTTGCAGAAGAATTTGCTTTGGAGAACACAATAGCAGCTCCTAAACCAAGGGGTCAGAATTATGTGTCCCAATCTGCAGTTGCATTGCGTTGCCGGGTTATGCCTCCTCCTTGCTTTAGGAACCCATATTTAAAAGATGTTTCAGAAAAGGAGATGGATCCTTTTGGAAACCAAAGATTGAAATGTGCAGGTCTCTTTCCTGCAAATAGTGGTGACGGGCTTTCACGCTATCGTGCTGACTTTCATGAAATTGTGCAAATTGGTAGAGGGAACTTTAGTAATGTTTTCAAAGTATTAAAACGAATAGATGGATGCTTGTATGCTGTTAAACAGAGCATCAGACCCTTACTCCTGGAAACAGAAAGGACAAAAGCTTTGATGGAAGTTCAAGCTTTGGCCGCCCTAGGTTTGCATCGGAACATTGTGGGCTACTATTCTTCATGGTTTGAAAATGAACATCTGTACATTCAGATGGAGCTATGTGATCACTGCTTATCCATAAAAAAGTACTCTGCGGCATTTACAGAAGCACAAGTGTTGGATGCCTTATTTCAGGTTGCCAATGCTCTGCGATTTATTCACGGGAAGGGAATGGCTCATCTAGATGTCAAACCCGATAATATTTATGTGAAAAATGGTGTTTATAAGCTTGGTGATTTTGGATGTGCGACTCTTCTTGATAGTAGCCTGCCAATTGAGGAGGGTGACGCACGTTATATGCCCCAGGAAATCCTTAATGAAAATTATGATAATCTTGACAAGGTTGATATCTTCTCCTTGGGAGCTTCTATTTATGAACTAATTCGCAGATTGCCTTTGCCAGAATCAGGATGTCAATTTTTTAATCTCAAGGAAGGCAAGTTTCCCCTCTTGCCTGGTCATTCGTTGCATCTTCAAAACTTGCTCAAGGTCATGATGGACCCTGATCCGGTTAAGCGGCCTTCTGCTAGAGAATTGGTAGAAAATCCAATTTTTTGTAAGAAAGATTCAAACAACAACTGCATTTAG 1512 0.4405 MSCVVVKTKMKGKSHKIGKKQSRKMKGALCNSNTRQLQLQLGQVSLIPLNQPSSTTSSSVSCFQNPLDSEPPNTSSSRVVLTADAVADDRDGILSQDFFCTPDYITPDNQNIFNGFDCDRDDTPCPKSPEKLTSTKSKRCRLDAMSVQPLSPTFSSDHQPAVELGKDSVAEEFALENTIAAPKPRGQNYVSQSAVALRCRVMPPPCFRNPYLKDVSEKEMDPFGNQRLKCAGLFPANSGDGLSRYRADFHEIVQIGRGNFSNVFKVLKRIDGCLYAVKQSIRPLLLETERTKALMEVQALAALGLHRNIVGYYSSWFENEHLYIQMELCDHCLSIKKYSAAFTEAQVLDALFQVANALRFIHGKGMAHLDVKPDNIYVKNGVYKLGDFGCATLLDSSLPIEEGDARYMPQEILNENYDNLDKVDIFSLGASIYELIRRLPLPESGCQFFNLKEGKFPLLPGHSLHLQNLLKVMMDPDPVKRPSARELVENPIFCKKDSNNNCI 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02351 503 Pfam Protein kinase domain 249 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02351 503 SUPERFAMILY Protein kinase-like (PK-like) 236 497 IPR011009 -
Phco2g02351 503 Gene3D Transferase(Phosphotransferase) domain 1 328 498 - -
Phco2g02351 503 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 58 499 - -
Phco2g02351 503 MobiDBLite consensus disorder prediction 57 76 - -
Phco2g02351 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 366 378 IPR008271 GO:0004672|GO:0006468
Phco2g02351 503 Gene3D Phosphorylase Kinase; domain 1 239 327 - -
Phco2g02351 503 ProSitePatterns Protein kinases ATP-binding region signature. 255 278 IPR017441 GO:0005524
Phco2g02351 503 SMART serkin_6 249 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02351 503 FunFam WEE protein kinase 239 327 - -
Phco2g02351 503 FunFam Wee1-like protein kinase 328 497 - -
Phco2g02351 503 ProSiteProfiles Protein kinase domain profile. 249 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02351 503 Coils Coil 502 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02351 Phco-Chr2 53911280 53914994 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Phco2g02351 Pkinase 1.6e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02351 2 53911280 53914994 Phco2g02351 2 53911280 53914994 ECH