Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02347 ATGGATCGAAGAGGAAGTGGGAATTTGATAGGGACGGAGGGTTCTCAATGCGGAGGAGGTAGGGATGCAATAAAGGGGCTGGGTTTAGGGTTAGGGTTAGGGCTGGGTGCTGGGAGGAGAGAGATGATGGAGTCTGAGCTCGAAGAGGGTGAGGCCTGCTCCTTTCAGAACCATGAGGATTATGATGCCACCGTTGATCCCGATGTTGCCCTCTCTTACATTGATGAAAAAATTCAAGATGTTCTGGGACACTTTCAGAAGGATTTTGAGGGTGGGGTGTCTGCTGAGAATCTTGGGGCAAAATTTGGTGGTTATGGATCATTTTTGCCCACATATCAGCGATCTCCTGTTTGGTCTCATCCAAGGACTCCACAAAAAAATCATAGTCAAAATACACCCAAATCTCCGAATAATTTGCTGCCAGAGGGTGGGCAGGGTGATGCTGTACAATGTTCGACTGGAACTCAGTCATCAAGACTTGGCCCAGGTTCTGGTAACTCTTCGGGGATAGCTGCAAACAAGGCTCTCTATTTAAATGATGGAACCCATCAAGAAAAATACTTGATAACCACTAATGTTGATACATCCACTTCTAAGCATGAGTCTCTAAACAAGAAAATTACTAGCACATCGGACCAGAAGACACTGAAGGTTCGAATCAAAATGGGTCCAGATAATTTGTCAACACGGAAAAATGCTGCAATATACAGTGAAATTGGTCTGGATGTGTCACCATCATCATCACTAGACGACAGCCCCTCAGAAAGTGAGGGGATTTCTCGTGGTCCTCAGGAAGCTCCTTTTGAATCTCCAACCATTATCCTTCAGATTATGACCGACCTCCCTCAGCTATTGTCACCACTTTCTGAAGGTATCATTGAATTAACGATAAAGGAAATGCGTGCCAGAGATAGCATCCCTGGTCTTGTTCATCTGGATGATGCAGAAAGTTTTGACATATCACTAAATGAATCTAATAATGTGAAAGGAGATAGAAAATTCTTAGGGGTGAGTGGGAGGAAAATGAAATCTCTGGAGGGTTTTGAATCCTCAATGGAAGTCAAGGGTTCTACAAAGAAGAATGCTCAGATTGAGACTGGAGTGTTGTCAAGAAAGGAACAAAGTACAGATGCATCTACTATGGAGGAGCTAGTTTCAAACACTATGAAGCTTCCACTTTTATCCAGTTCATATTCTTTCAATGATGACTTGGTTAGGGTTGATGATGGGCCATGTGATTCTTTGAAGGAAGCCCACAAAGTTACGGAGAGGGAGAAAACCTTCTCTGGTCAGGGACAAAAGGAATGGTCGGAGCCAACACCTACTGAGGTGAATGGTTTTGCTGAGAGGGTGAAGGGAAGCTCAAGAAGAAAAGTTGTGGGAGATAAGGCTCCTTTTGATGACTATATAGTGAAAGAAAATTCTCATGGGGATTATAATTGCCACTCAATAATAGCTGAATCTAATGTTTCTAAAGCTAGGACAACATCAAACACTGAAGAGCCTCCTAAGAAGGCCAATCAGAGAGGTAGCCTATGTGAACAAGACAGTATGGCATTACCTGTTGTGACAGAACATCCCCTTCCGGTTGCTAAGAAGAAGACAAAGGGAAGTCATGACACCATGGTTATGGAGAGGGAAAAAGAAAACTTGAAGATTGGATCCTCTTCGGTTCCTAAAACTAAAAGGAGTTCTGATGACAGTTCTGCATCAAAAAATGAGACTGAAGATGTTAGAGTACAAAAGAGTCTAGGAAAGACTAGAGATACATATAGAGATTTCTTTGGAGAATTGGAAGACGAGGAGGACAAAATGGATGCACTGGAGACCCCTTTTGAAGAAAAACTGAAGGAATCTGAGGTGGTTGGGAGGAGTGCACCTACAACTAGTCGTGGAGCAAAGGAGAGACCAGGTGCTAAGAAAGTTGATAAGCTATTGACAGCTGAAATGTACCCTAAAACAGCCTCAAATATTTGGTGCACTGGAAATGCAAACGGAACTGCTGTAGAGAATGGTAAAGGGATTCCTGTAATGATACCTCCTGTTGATATGGATGATAGTTGGGTGATGTGTGAGAGTTGTCATCAATGGCGTCTTCTTCCTGTTGGAACAAATCCTGATCACCTACCTGAAAAGTGGCTGTGTAGTATGATTAATTGGCTGCCGGACATGAATCGATGTAGCTTTAGTGAGGATGAAACCACTAAAGCACTTATTGCATTATACCAAGCACCTCCTTTTGACAGTCAAAGCAGCCTGCAGAATGTCTCTGGCAGTGTTATGGTGGGAGGAGCCATGGTAACATCCCAGCATCCTGACCAACAACAGCTAAATAATGATGTGCATGCAGTACCTGGGGGGAAGAAAAAGTTTGTGAAGGAGATACCAAATCCTATAAATAAAGACAACTTTTCTCAATCATCATATCCTTTCAAGAAAAACGTGTTGTCTGCAGTGAAAAGTAGGAGTTTAAATGATGTGAACAAATCTCCTGTCATGAGTGAGGCTGATGTTCCAACAGAGAAACACAAAAATAAGCGTAGGACGCTTGAGCGCAGTTCTGATATAGGTGATACAAAGAATATGAAGGTCAAAAGCAGGAGGGATCATGATGAAGATTTTTCTAGGCCATCCAAGAAATCTAAGACTCACAAGGCTCATTCTACCAATGAAGAGTGGATTGTAGAACAGGGTGGGACTACTAGGAAGGTGGGTGTTCAAAGTTCAAATAGCACTTTTCCAACTACTTCAGTTACCAAAGATCGACCAAGACAGAAAGCCCACTCCTCTTCAAGGGACTCCAAATCAAGAAAAGACAAGATTCCAGTTTCCGCTGAAAACACAAAAGATAAAGGTCATGGTTCATTGGATGAGGGATCTCTTGATCTGGGGAATTGTGATTCAATTGGTAGTGTGAAAAAGAGGAAACTTAAGGGATATCAAGATGTTATAACTTACAGCCCAGGAAATCCTCGCATACAGGAGAGCAAAACTTCTGAGCATGATTTCAGTGATTCAAGGAAGGAAAAGAAGGCAAAAAGTTCAAAATCTGGAGGCAAAGAATCAAGTACAAGTAAAGGCAGTGGTAGTGGTAGGACTGACAAAAAAGTTAGTCATGCAAAAAACCAAAAATTCAAGCAAAACCCTGAGAGCAGTCTATCACATCGGAGCTTGGATGGCATGGACTGTTCTAAAAGGGACTTGGGGTCTTTACAGGTTTCGGTTGCTGCCACTTCAAGCTCTTCCAAGGTTTCTGGCTCTCACAAAACCAAAGCCAGCTTCCAAGAAGTGAAGGGCTCACCTGTGGAATCGGTGTCTTCATCACCTATTCGAATTTCAAATGCTGATAAGTTTTCAAACAAGGAAATTACTGGGAAAGATGATTCGCATGAGATTGCTGTTGTAGATAGTCCAAGAAGATGCTCAAATCGTGATAATGATGGTGGGAGTGATCGATCTGGAACAGCCAGGAAGGAGAAATCTTTAACCATTGCCAACAGGCCAGATTTTCAGGACAAAGGTGTTAATTACATGTCCGATACTAAGATTAAAGCTGAAACAATCAGCTTTTGTACCAATGGTGGTGTTGACACCATAGTCCCAGATGGGACCTATGCAAGCAAAGAGCAGATTAAACATCCAGGTGAAGACAAAACTGATGTTTCTTATGCTAATATGTCTCATACAAGGAAGAATGGCATGGAATCTGGTTTCGAGGACAACAATGATGGCTGTAAGTCAGAGTCCCATGCAGATAAGGTCAAGGTCAAGAATAGTTCTTCAAGTCAACTGAAAAACCAGTCTCCTCTAGGTGAGGCAAAACATAAGGATGGAAAAAATAAGTTGCAGGAGAAGTTCGGAATCAAGCCTGACCAAAGTGAGAATATACATGCTGTCAAGAAAGATTATACAGAGAAAAATGAGACTAGGAAAAAAGAAAATCACTTAATTCGAGGTCATGACTTTCAAGATGTTAGTATGGATGCCCTTTGCAAACAGGATGCATTTCATGCTCCATCTCAGACTCAGTTGCCAGATTCTGATAGATCCACAAAGAAGTCTCTGTTGGAAAAAACTGATCAAGAAGTACATGGAAAAGGGAAGCTGTTGTCATCATTGTCATCACGACCAGTTGGTTTACTTAAAGGAAATGGAGATGTCGAAGTTGGTCCTTCCAAAGTCGATGATGCGTCAAAGCTACCAAAAAAGCAATTGAAAAAGACCGACCATCAAAATGGAAATCAGCAAACTGGTTCAAGAAATCCCATACTTAATGGTCACAAGTCGAAGGAGCTTGATGCCCCTAGTCCAGTTAGAAGGGATTCTTACAGCCATGCTGCCAACAATGCTGTGAAAGAAGCTAAAGATCTTAAGCATCTGGCTGATCGTCTTAAGAATTCTGGATCTGGTGAAAGCACTACTCTTTACTTCCAGGCAGCCCTCAAATTTCTTCATGGAGCCTCTCTGTTAGAATCTGGCAACAGTGATAATGCTAAACACAGTGAGATGATTCAATCAAAGCAAATGTATAGTAGCACTGCAAAATTGTGCGAGTTTTGTGCTCATGAATATGAGAAATCAAAAGACATGGCTTCAGCTGCACTTGCCTACAAATGCATGGAGGTAGCATATATGAGGGTAGTGTATTCTTCACACACTAGTGCAAGCAGAGATCGGCATGAGTTGCACAATACTCTGCAAATGATTCCTCTTGGCGAGTCTCCATCGTCATCTGCCTCTGATGTTGACAATGTTAACAACTCTACAGCTGCTGACAAGGTTGTCACCATATCTAAGAGTGTCAATTCGCCCCAAGTAGCTGGAAACCATGTTATTGCTGCACGACATCGTCCTAATTTTGTGCGATTGCTTGGTTTTGCTCAGGATGTTAATTTTGCCATGGAAGCGTCAAGGAAATCACGTAATGCTTTTGCAGCTGCTAATTCAAGCCCTGGTGTGGGCAAGAATACAGATGGTATCTCCTGTATCAAGAAGGCTCTTGATTTTAGCTTTCAAGATGTGGAGGGGTTACTTCGTTTGGTACGGATTGCTGCGGAGGCCATTAATCGTTAA 5073 0.423 MDRRGSGNLIGTEGSQCGGGRDAIKGLGLGLGLGLGAGRREMMESELEEGEACSFQNHEDYDATVDPDVALSYIDEKIQDVLGHFQKDFEGGVSAENLGAKFGGYGSFLPTYQRSPVWSHPRTPQKNHSQNTPKSPNNLLPEGGQGDAVQCSTGTQSSRLGPGSGNSSGIAANKALYLNDGTHQEKYLITTNVDTSTSKHESLNKKITSTSDQKTLKVRIKMGPDNLSTRKNAAIYSEIGLDVSPSSSLDDSPSESEGISRGPQEAPFESPTIILQIMTDLPQLLSPLSEGIIELTIKEMRARDSIPGLVHLDDAESFDISLNESNNVKGDRKFLGVSGRKMKSLEGFESSMEVKGSTKKNAQIETGVLSRKEQSTDASTMEELVSNTMKLPLLSSSYSFNDDLVRVDDGPCDSLKEAHKVTEREKTFSGQGQKEWSEPTPTEVNGFAERVKGSSRRKVVGDKAPFDDYIVKENSHGDYNCHSIIAESNVSKARTTSNTEEPPKKANQRGSLCEQDSMALPVVTEHPLPVAKKKTKGSHDTMVMEREKENLKIGSSSVPKTKRSSDDSSASKNETEDVRVQKSLGKTRDTYRDFFGELEDEEDKMDALETPFEEKLKESEVVGRSAPTTSRGAKERPGAKKVDKLLTAEMYPKTASNIWCTGNANGTAVENGKGIPVMIPPVDMDDSWVMCESCHQWRLLPVGTNPDHLPEKWLCSMINWLPDMNRCSFSEDETTKALIALYQAPPFDSQSSLQNVSGSVMVGGAMVTSQHPDQQQLNNDVHAVPGGKKKFVKEIPNPINKDNFSQSSYPFKKNVLSAVKSRSLNDVNKSPVMSEADVPTEKHKNKRRTLERSSDIGDTKNMKVKSRRDHDEDFSRPSKKSKTHKAHSTNEEWIVEQGGTTRKVGVQSSNSTFPTTSVTKDRPRQKAHSSSRDSKSRKDKIPVSAENTKDKGHGSLDEGSLDLGNCDSIGSVKKRKLKGYQDVITYSPGNPRIQESKTSEHDFSDSRKEKKAKSSKSGGKESSTSKGSGSGRTDKKVSHAKNQKFKQNPESSLSHRSLDGMDCSKRDLGSLQVSVAATSSSSKVSGSHKTKASFQEVKGSPVESVSSSPIRISNADKFSNKEITGKDDSHEIAVVDSPRRCSNRDNDGGSDRSGTARKEKSLTIANRPDFQDKGVNYMSDTKIKAETISFCTNGGVDTIVPDGTYASKEQIKHPGEDKTDVSYANMSHTRKNGMESGFEDNNDGCKSESHADKVKVKNSSSSQLKNQSPLGEAKHKDGKNKLQEKFGIKPDQSENIHAVKKDYTEKNETRKKENHLIRGHDFQDVSMDALCKQDAFHAPSQTQLPDSDRSTKKSLLEKTDQEVHGKGKLLSSLSSRPVGLLKGNGDVEVGPSKVDDASKLPKKQLKKTDHQNGNQQTGSRNPILNGHKSKELDAPSPVRRDSYSHAANNAVKEAKDLKHLADRLKNSGSGESTTLYFQAALKFLHGASLLESGNSDNAKHSEMIQSKQMYSSTAKLCEFCAHEYEKSKDMASAALAYKCMEVAYMRVVYSSHTSASRDRHELHNTLQMIPLGESPSSSASDVDNVNNSTAADKVVTISKSVNSPQVAGNHVIAARHRPNFVRLLGFAQDVNFAMEASRKSRNAFAAANSSPGVGKNTDGISCIKKALDFSFQDVEGLLRLVRIAAEAINR 1690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02347 1690 ProSiteProfiles Zinc finger CW-type profile. 682 735 IPR011124 GO:0008270
Phco2g02347 1690 MobiDBLite consensus disorder prediction 548 584 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 1350 1365 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 836 891 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 1077 1119 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 995 1017 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 921 957 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 1044 1058 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 116 139 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 1392 1409 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 1270 1320 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 242 259 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 116 167 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 1337 1441 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 893 920 - -
Phco2g02347 1690 Coils Coil 1447 1467 - -
Phco2g02347 1690 Gene3D - 680 737 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 1230 1320 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 827 1065 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 242 267 - -
Phco2g02347 1690 Pfam CW-type Zinc Finger 688 733 IPR011124 GO:0008270
Phco2g02347 1690 MobiDBLite consensus disorder prediction 1233 1255 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 1410 1424 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 1077 1165 - -
Phco2g02347 1690 PANTHER CW-TYPE ZINC FINGER 40 1690 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 491 512 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 148 167 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 1120 1165 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 616 639 - -
Phco2g02347 1690 MobiDBLite consensus disorder prediction 565 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02347 Phco-Chr2 53866211 53874695 Wgd