Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02345 ATGACGGCCCACAAACAGCAAATGGTCTGGAACACCAAGACTAGGGTTTCTTTCTCCCCGTTGCAGCATCAGAGAAGGGGAAACATGGTTTCACTGAAACTGCAGAAGCGGCTTGCAGCCAGCGTGCTGAAGTGTGGAAGAGGAAAGGTTTGGCTTGACCCAAATGAAGGCAACGAAATCTCCATGGCCAATTCTCGGCAAAACATCAGGAAGTTGGTAAAGGATGGGTTTATCATCAGGAAGCCAACCAAGATTCACTCCCGATCACGTGCTCGTAGGATGAAGGAGGCAAAGCGGAAGGGCCGTCACTCTGGATATGGTAAGCGTAAGGGTACGAGGGAGGCAAGGCTTCCCACCAAGATACTTTGGATGAGAAGGATGCGTGTGCTCAGACGGTTGCTTCGGAAGTACAGGGAGTCAAAGAAAATTGACAAACACATGTACCATGACATGTACATGAAGGTGAAAGGTAATGTTTTCAAAAACAAGAGGGTGTTGATGGAGAGTATTCACAAGTCTAAGGCTGAGAAGGCAAGAGAAAAGACATTGTCTGATCAGTTTGAGGCTAAGCGAGCAAAGAACAAGGCTAGCAGGGAAAGGAAAATTGCTCGGAGGGAGGAACGCCTAGCCCAAGGTCCTGTTGAGAAGGTATCTACGGCACCCAGTGCCCCTGCACCCCAATCTGCTCAACCGCCAAAGAAATCGAAGAAGTAG 714 0.4902 MTAHKQQMVWNTKTRVSFSPLQHQRRGNMVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERLAQGPVEKVSTAPSAPAPQSAQPPKKSKK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02345 237 ProSitePatterns Ribosomal protein L19e signature. 35 54 IPR023638 -
Phco2g02345 237 SUPERFAMILY Ribosomal protein L19 (L19e) 31 172 IPR035970 GO:0003735|GO:0005840|GO:0006412
Phco2g02345 237 MobiDBLite consensus disorder prediction 172 237 - -
Phco2g02345 237 PANTHER 60S RIBOSOMAL PROTEIN L19 29 216 IPR039547 GO:0003723|GO:0003735|GO:0022625
Phco2g02345 237 CDD Ribosomal_L19e_E 32 195 IPR033935 GO:0003735|GO:0022625
Phco2g02345 237 FunFam Ribosomal protein L19 85 222 - -
Phco2g02345 237 MobiDBLite consensus disorder prediction 85 113 - -
Phco2g02345 237 MobiDBLite consensus disorder prediction 172 212 - -
Phco2g02345 237 SMART Ribosomal_L19e_2 31 174 IPR000196 GO:0003735|GO:0005840|GO:0006412
Phco2g02345 237 FunFam Ribosomal protein L19 29 84 - -
Phco2g02345 237 Gene3D - 85 219 - -
Phco2g02345 237 Hamap 50S ribosomal protein L19e [rpl19e]. 31 177 IPR000196 GO:0003735|GO:0005840|GO:0006412
Phco2g02345 237 Pfam Ribosomal protein L19e 32 173 IPR000196 GO:0003735|GO:0005840|GO:0006412
Phco2g02345 237 Gene3D - 30 84 IPR015972 GO:0003735|GO:0005840|GO:0006412
Phco2g02345 237 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02345 Phco-Chr2 53851947 53853838 Proximal