Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02316 ATGGCCAGGGGTTCTTCGCCTCACTCTCAAACTTCATCACCCCCTGTCGGATATAAAGTTAAATATGCAAGTGGAGACGATCCATATAGGGAAACTGATCTCTTTCAGGACACCTTAGTGCTCAATAGTCCTTTCACTGAAACGGAGTTTGAAAATCTCAATCTGGACACTGAGATTCTAGAGGATTCTGAGCCTCCTGAGGACATGACAACTGGAAAAATGTGCGAGTATGGACAAGTTGTTCTGGATAGCGAGGATGAAGAAATGGATGATAGACATGTTGGCAAAGAATTTCTTGAGGATGAAACTAGTCCAACAGTGAAAATTCCTTCGACTCTCTTCCAGAAAGGACTGTCCAAGCCACCTTGTGAGCTAGTAGAAGCAAACACCACCACTTTAGGGAGCTCTACTGCTGGCGACAAAAGAACTTTAGTTGATTCGGACAGCTTTGATGACGACAACCTTTTATATCCACCTGCAACCCTAAATCACATTCACTCACCAGAGCCTGGGGATTCAACCCAAGCTGCACTTGGCTTTGTGGATCAGTACTTGTCGTCAAATGATGTGGACTTGTTTCAAGGAGTTCATTGTGGAAAGACCACTAGGGAGAAATCACCTCATGTCCTGAATGCAAGAGGACCACTAAATCTTGCTAAGAAAATTAAAGCCCGAACTAAAAATGAAGAGAAAGAAGCGTTCAAATTGGTTGACAGTTGCCAACATGACAACAGAGGTCGTATGTTTAGTCAAAAAATTGAAGCATCTTCAAATTTTGGAAGATACAAACAGACATATACGAGAAGGGAAAAGGGTGGCCATCTTAACTGTAGTACAAGTAATACATTTGATGGGAAGTTAGGCCAAGGACCAAGAATGGCAATTGAAAATGATAACTCTCTCAAGGAATTTAATGTTCATCCAAGTTCTATAAGAGAGAATGCTGATGTTTATTCCGGTGAAACACATATAGAGGATATGTCTGATATTGGTTTAGGCACTCAAATAGCTGCTGAAGCAATGAATGCCTTAGCTTTAATGCCCCCTTATGGCTGCCAGTTCAATGATACCCATCAACCAGAGAATGCATTAGATGGCTCTTTGAGCAATTTGACAGAGAATGAAGCTCGTCTGAGAAATTCTTCAAATATTCAGAATCCTAGGTTACGTTCTACTAGAATAAAATCAAATAAGAAAAATGTATCCTCCCCTAGATTTAGTAAAATAACTTATAGCTCTTCGTGCAAGGACACTGACGAACAGGAGTCAAATGTTGTCTCTGGCAAAATGAAAAAAATGATGAAAGGCAAGTCAACTGCTGAGGGGCGGTTTGAAAATAATAATAGTTTGCCAGTATGCAGTAAACATGTATTGCTGGAAGAGGTTTGCCCAATAGGAGAATACACAAGTTTCGAACCTGCTGCTGAAGAATCCGAACATAGGAACAATGAGAGTGGACATCAAAGAATCAAACATCAGCCAAGCCTTTTTACAGAGGAGAACAATAATGTCAAGGAGAAGGGTATTAAACACAAGAGAAAGGAGACTGGTTTAGTGGCTGATCCAGTGAAGTTGGGAGCTAGGAGTAAGCGTCTTAAATTTCTTGCCGATTCATGTATACTTTCTAAGAAAGTCAGGTTGAATCATCTGACTGAAGTTAGCCCAGAGTTATCTGCAACCCGCAGTTTTTCATGGACTGATTCTTGGGTTTATCCAAAAAGATCACGAGGGAAGAGAAAGGGGGCTAATATGGGAACCAATCTCAATGCACCAACTGTTTTGTGTACTGATGGAAAAGAAAACAATGTATTCTCCACTAGAAGTACAGAGGACCAGGCCAATGCTTCATGTGTTGATGATGGCAGATGCTTGTTACAGGGGGACTTTGTGCCACCAGGCTCATCTGGTGATGCAATGAAGGTACAAAACTGGCCTGATATGCACCCTTTATATTTGACACATGTTGAAAGAGCATCAAACAAAAGTGTTGCACAATCAAGATCAGGAATTCGTGCTACAGTTGTGGCAAGTGAAGGCGTAAAAGTTTCAAATGTAAACCATTCATACACTGAGCATCACAAAAATCTGTGTGTAAAAACCCTGCCTAAGTCTTCACTTTTGAAAGAGGTTATCAGATTAGGAGTTCCTGAGTCCATGTCAGATATGATGTGGAAAGAACTGAGGCATCGAAGAGATATGACAGATGTTCGAGTTCTGTTTAGTCAGCATTTGGATGAGAGTATCATTAAGCAGCAAAAAAAGATATTGAAGCGTCTCAATATATCTGTTGCATCGAGTTCAATGGAGGCCACACATTTCGTAGCTGACAAATTTACGCGCACAAAGAATATGTTGGAAGCCATGGCTCTTGGGAAATTAGTTGTGAATCACTTATGGCTTGAGAGCTGTGGACAAGCCAACTGTTTTATTGACGAGAAAAATTACATTCTGCGGGATATGAAAAAGGAGAAGGAAATAGGCTTCAACATGGCAGTTTCTCTTGCTCGCGCAAGACAAAAACCACTCCTAAAGGGTAAAAGAGTCTACATCACGCCACATGTTAAACCTGATAAGGAAGTGATTGCAAGCTTGGTCACAGCTGTTCATGGCCAGGTAGTAGATCAAAGTGAGGTGTGTGCTGACATGAATGATAAGATCTTAGATGATCTGTTAATTCTTTCCTGTGAAGACGACTATGCAATATGCCATGGTTTATTTAAGAGAGGAACTGCAGTTTACAGTTCAGAGCTTGTTCTGCATGGAATTGTAATCCAAAAATTAGAACTTGAGAGACATCAACTCTTCATGAATCAAGTTACAAGGAGTAGCAATTGTCCAAGTACGTCTAATCGGTTTGGGAAGGTTTACAGAAGGCGTCGAGGCCTTTTCCTGAATTTTAGCTGA 2904 0.4084 MARGSSPHSQTSSPPVGYKVKYASGDDPYRETDLFQDTLVLNSPFTETEFENLNLDTEILEDSEPPEDMTTGKMCEYGQVVLDSEDEEMDDRHVGKEFLEDETSPTVKIPSTLFQKGLSKPPCELVEANTTTLGSSTAGDKRTLVDSDSFDDDNLLYPPATLNHIHSPEPGDSTQAALGFVDQYLSSNDVDLFQGVHCGKTTREKSPHVLNARGPLNLAKKIKARTKNEEKEAFKLVDSCQHDNRGRMFSQKIEASSNFGRYKQTYTRREKGGHLNCSTSNTFDGKLGQGPRMAIENDNSLKEFNVHPSSIRENADVYSGETHIEDMSDIGLGTQIAAEAMNALALMPPYGCQFNDTHQPENALDGSLSNLTENEARLRNSSNIQNPRLRSTRIKSNKKNVSSPRFSKITYSSSCKDTDEQESNVVSGKMKKMMKGKSTAEGRFENNNSLPVCSKHVLLEEVCPIGEYTSFEPAAEESEHRNNESGHQRIKHQPSLFTEENNNVKEKGIKHKRKETGLVADPVKLGARSKRLKFLADSCILSKKVRLNHLTEVSPELSATRSFSWTDSWVYPKRSRGKRKGANMGTNLNAPTVLCTDGKENNVFSTRSTEDQANASCVDDGRCLLQGDFVPPGSSGDAMKVQNWPDMHPLYLTHVERASNKSVAQSRSGIRATVVASEGVKVSNVNHSYTEHHKNLCVKTLPKSSLLKEVIRLGVPESMSDMMWKELRHRRDMTDVRVLFSQHLDESIIKQQKKILKRLNISVASSSMEATHFVADKFTRTKNMLEAMALGKLVVNHLWLESCGQANCFIDEKNYILRDMKKEKEIGFNMAVSLARARQKPLLKGKRVYITPHVKPDKEVIASLVTAVHGQVVDQSEVCADMNDKILDDLLILSCEDDYAICHGLFKRGTAVYSSELVLHGIVIQKLELERHQLFMNQVTRSSNCPSTSNRFGKVYRRRRGLFLNFS 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02316 967 CDD BRCT_PAXIP1_rpt6_like 842 928 - -
Phco2g02316 967 ProSiteProfiles BRCT domain profile. 728 817 IPR001357 -
Phco2g02316 967 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 728 817 IPR001357 -
Phco2g02316 967 MobiDBLite consensus disorder prediction 1 17 - -
Phco2g02316 967 Gene3D BRCT domain 841 942 IPR036420 -
Phco2g02316 967 SMART BRCT_7 730 807 IPR001357 -
Phco2g02316 967 Gene3D BRCT domain 724 840 IPR036420 -
Phco2g02316 967 CDD BRCT_MDC1_rpt1 736 810 - -
Phco2g02316 967 SUPERFAMILY BRCT domain 727 832 IPR036420 -
Phco2g02316 967 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 101 934 - -
Phco2g02316 967 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02316 Phco-Chr2 53665732 53670314 Dispersed