Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02279 ATGAACACTGGACCATGGAATTCTTCTTCCTCCAAGATCAGGTCCAGATCCCCCTTCCAAGTTCGCCCCTTCCGGACTAAGAATTCTCAAGAAAACTTGGACAGGTTCATTCCCAATCGCTCGGCGATGGATTTCGGATATGCGCACTACATGCTCACGGAGGGTAACAAGAAGGGCAGGGAGAAAGAGAACGATGAGGTGACGTCACCATCTCGAGAAGCATACCAGAAGCATCTCGCCGAGGCTTTCAACATGAATCGCACTCGAATCTTGGCCTTCAAGAACAAACCTCCAACGCCGGTTGAACTCATTCCCAAGTGCATCCTTTCGCCTCCTCCCCCACCCAATTCCTCTAAGCCCAGACGTCACATTCCTCAGAGTTCTGAGAGAACGTTGGATGCTCCTGATATACGGGATGACTTTTATTTGAACCTATTGGATTGGGGTAGCGGCAATGTTCTTAGTATTGCCCTTGGGAACACTGTGTATCTGTGGAATGCCGATGATAGCTCCACTTCTGAACTTGTCACTGTGGATGAGGAAGATGGTCCTGTTACAAGTGTTGCCTGGGCTCCCGATGGACGCCATTTAGCCATTGGTTTGAACAATTTTCATGTCCAGCTCTGGGATTCTCATTCTTCTAGGATGGTAAGAACATTAAGAGGTGGACATCAAGCACGAGTAGGTTCACTGTCTTGGAACAATCATATCCTCACAACAGGAGGGATGGATGGTAGAATCGTTAACAACGATGTTAGAGTGAGGTCTCATATTGTTGAATCTTACAGAGGACATCAGCAAGAGGTTTGTGGGCTTAAGTGGTCTCCCTCAGGACAACAACTGGCGAGCGGGGGCAACGATAATGTTATTCACATATGGGACAGGGCTAGTGTCTCTTCAAATTCAGCAACCCGTTGGCTTCACAGATTTGAGGAACATAGAGCTGCTGTGAAGGCACTAGCTTGGTGTCCATTCCAAGCAAATCTGCTTGCTTCAGGTGGAGGTGGTGGCGATCACTGCATTAAGTTCTGGAACGCGCATACAGGGGTGTGCTTGAACTCTGTCAACACAGGCTCACAAGTGTGCGCTCTGCTGTGGAACAAGAATGAGCGTGAGTTGCTTAGCTCTCATGGTTTCACCCAGAACCAGCTTACTCTTTGGAAATATCCTTCAATGCTTAAGATGGGAGAGCTCAAGGGTCATACCTCCAGGGTGTTGTATATGACGCAAAGTCCAGATGGGTGTACTGTGGCTTCTGCAGCAGGGGACGAGACTCTGAGATTTTGGAATGTTTTTGGAACTCCACAAGCTTCCAAACCAGCGCCGAAAGCCAATACTGAACCCTTTGCTCATGTGAATCGTATTCGCTGA 1371 0.4836 MNTGPWNSSSSKIRSRSPFQVRPFRTKNSQENLDRFIPNRSAMDFGYAHYMLTEGNKKGREKENDEVTSPSREAYQKHLAEAFNMNRTRILAFKNKPPTPVELIPKCILSPPPPPNSSKPRRHIPQSSERTLDAPDIRDDFYLNLLDWGSGNVLSIALGNTVYLWNADDSSTSELVTVDEEDGPVTSVAWAPDGRHLAIGLNNFHVQLWDSHSSRMVRTLRGGHQARVGSLSWNNHILTTGGMDGRIVNNDVRVRSHIVESYRGHQQEVCGLKWSPSGQQLASGGNDNVIHIWDRASVSSNSATRWLHRFEEHRAAVKALAWCPFQANLLASGGGGGDHCIKFWNAHTGVCLNSVNTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMLKMGELKGHTSRVLYMTQSPDGCTVASAAGDETLRFWNVFGTPQASKPAPKANTEPFAHVNRIR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02279 456 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 262 294 - -
Phco2g02279 456 MobiDBLite consensus disorder prediction 105 131 - -
Phco2g02279 456 ProSiteProfiles Trp-Asp (WD) repeats profile. 262 294 IPR001680 GO:0005515
Phco2g02279 456 ProSiteProfiles Trp-Asp (WD) repeats profile. 398 431 IPR001680 GO:0005515
Phco2g02279 456 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 21 450 IPR033010 GO:0010997|GO:0097027|GO:1904668
Phco2g02279 456 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 398 431 - -
Phco2g02279 456 Gene3D - 86 433 IPR015943 GO:0005515
Phco2g02279 456 SMART WD40_4 303 345 IPR001680 GO:0005515
Phco2g02279 456 SMART WD40_4 171 210 IPR001680 GO:0005515
Phco2g02279 456 SMART WD40_4 255 294 IPR001680 GO:0005515
Phco2g02279 456 SMART WD40_4 348 388 IPR001680 GO:0005515
Phco2g02279 456 SMART WD40_4 391 430 IPR001680 GO:0005515
Phco2g02279 456 SMART WD40_4 213 251 IPR001680 GO:0005515
Phco2g02279 456 CDD WD40 160 430 - -
Phco2g02279 456 MobiDBLite consensus disorder prediction 1 21 - -
Phco2g02279 456 Pfam WD domain, G-beta repeat 260 294 IPR001680 GO:0005515
Phco2g02279 456 Pfam WD domain, G-beta repeat 395 430 IPR001680 GO:0005515
Phco2g02279 456 Pfam WD domain, G-beta repeat 307 345 IPR001680 GO:0005515
Phco2g02279 456 MobiDBLite consensus disorder prediction 105 120 - -
Phco2g02279 456 MobiDBLite consensus disorder prediction 437 456 - -
Phco2g02279 456 SUPERFAMILY WD40 repeat-like 138 431 IPR036322 GO:0005515
Phco2g02279 456 ProSiteProfiles Trp-Asp (WD) repeats profile. 178 219 IPR001680 GO:0005515
Phco2g02279 456 ProSitePatterns Trp-Asp (WD) repeats signature. 417 431 IPR019775 -
Phco2g02279 456 Pfam Anaphase-promoting complex subunit 4 WD40 domain 177 235 IPR024977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02279 Phco-Chr2 53399586 53401455 Transposed