Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02227 ATGTCTGCCTCCAGAAAGAAGCTTCTTCTGAACACCGTGTCCGTGAAACTAGGCTGCGGCACCTGCAGAGGGCCAAAGCTCTCTCGCATATTCCATCCAAAGCCTAAACCCAAGAACCTACCCACTTACCAAAACCACAAAAACCATTACAGCCATTTCTCTTCTTCCTCTTCTTCAGCCCAATGGGCTGACACCACCACCACCACCACCACCAACACCAACACCACATTCTCTCCCTACGTTAACTTTTCTGAGTCAGACTCATACTTGAAGGGTGCCAGAACAGTGGGGGGTTTGGGAAGAGCTGGGAAAGAAGGGGTGGCAGTAGAGAAAGACTCTGATGACCCTTATCTGGACTTCAGACATTCCATGCTGCAAATGATATTGGAGAACGAGATATACTCGAAGCAAGATCTCAGAGAGCTTCTTAGTTGCTTCCTTCAGCTCAATTCACCGCACCATCATGGGGTTATAGTCAGGGCTTTCACTGAGATCTGGAATGGCGTCTTCTCTGCCAGGTCCAATTCACACATCAAACGTAAGCCACGTTCAATGTTATCGAGTCCAACTCAGCCACAATCTTTGTTGAGCAACTATGCCAATCAGATTGTACTACAACATTTTGATCAACAATTTGTAAAGAGGAAAATAGAAATCACAACGGAGGACCTGAATACACTTGGTTGGTCCCTCCCTAGAGTTGGGTTTGGTGAAATGGCTCCCGAATTTTGA 732 0.4672 MSASRKKLLLNTVSVKLGCGTCRGPKLSRIFHPKPKPKNLPTYQNHKNHYSHFSSSSSSAQWADTTTTTTTNTNTTFSPYVNFSESDSYLKGARTVGGLGRAGKEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKQDLRELLSCFLQLNSPHHHGVIVRAFTEIWNGVFSARSNSHIKRKPRSMLSSPTQPQSLLSNYANQIVLQHFDQQFVKRKIEITTEDLNTLGWSLPRVGFGEMAPEF 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02227 243 ProSiteProfiles OVATE domain profile. 109 168 IPR006458 -
Phco2g02227 243 Pfam Transcriptional repressor, ovate 113 169 IPR006458 -
Phco2g02227 243 NCBIfam uncharacterized plant-specific domain TIGR01568 107 167 IPR006458 -
Phco2g02227 243 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 47 172 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02227 Phco-Chr2 52957970 52959020 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phco2g02227 Ovate 8.5e-24 No_clan