Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02205 ATGCCACCAGGTTATCGTTTCTACCCTACAGAAGAGGAGCTGATTTCGTTTTATCTTCATAATAAACTCGAAGGAGAAAGAGATGACATGAATCGTGTTATCCCAGTGGTTGATATATACGATTACAACCCCTCCCAACTCCCACAAATCTCAGGAGAGGCGAGTCTGAGAGACACGGCGGAGCAATGGTTCTTTTTCATTCCGAGGCAAGAGAGTGAAGCTCGAGGAGGAAGACCGAGACGTCTCACAACCACAGGGTACTGGAAAGCCACAGGGTCTCCAAATCATGTTTATTCTTCCGACAATCGCATCATAGGCATTAAAAGGACTATGGTTTTCTACAGTGGAAGAGCTCCAAACGGAGCCAAAACCGATTGGAAGATGAACGAGTATACGGCCATCAAAGATTCACAGGTGAACCATCATCCTCTAAAACTAACCATTAGGTTAAGGAAGGAATTCAGTTTATGCAGAGTGTACAAAAAATCGAAGTGTTTGCGTGCGTTTGATAGAAGACCACCACCGAGGAGGAACACAGTGAGGTATTCCAGTGCTGAAAATGGTGAAGAGCAACAAAAGGGTTCGATCTCAACGTCTTTTGATTATCATAAGCATCAATTGTTAGAGAGAAGTGCAACATGCTCACCAGAGAGTTCTTCCTCCGAAGACCTTGACCATGACCAACCCCCCCTGCACGGTGAGGGAGAAACCCAAATGGATGTTGACAACGACCCTTTTTTGGATTGGGAGAAAGTGGATTTGTTCTTGGGATCGGAACTATGA 783 0.4508 MPPGYRFYPTEEELISFYLHNKLEGERDDMNRVIPVVDIYDYNPSQLPQISGEASLRDTAEQWFFFIPRQESEARGGRPRRLTTTGYWKATGSPNHVYSSDNRIIGIKRTMVFYSGRAPNGAKTDWKMNEYTAIKDSQVNHHPLKLTIRLRKEFSLCRVYKKSKCLRAFDRRPPPRRNTVRYSSAENGEEQQKGSISTSFDYHKHQLLERSATCSPESSSSEDLDHDQPPLHGEGETQMDVDNDPFLDWEKVDLFLGSEL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02205 260 ProSiteProfiles NAC domain profile. 1 162 IPR003441 GO:0003677|GO:0006355
Phco2g02205 260 MobiDBLite consensus disorder prediction 211 245 - -
Phco2g02205 260 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 211 - -
Phco2g02205 260 Gene3D NAC domain 10 166 IPR036093 GO:0003677|GO:0006355
Phco2g02205 260 MobiDBLite consensus disorder prediction 220 245 - -
Phco2g02205 260 MobiDBLite consensus disorder prediction 180 197 - -
Phco2g02205 260 Pfam No apical meristem (NAM) protein 2 132 IPR003441 GO:0003677|GO:0006355
Phco2g02205 260 MobiDBLite consensus disorder prediction 170 197 - -
Phco2g02205 260 SUPERFAMILY NAC domain 1 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02205 Phco-Chr2 52726490 52728219 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco2g02205 NAM 2.9e-30 No_clan