Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco2g02188 | ATGGCGACGAAGAAATTGGTGAAAGCGAGAACATTGGCAACACCGAAACCTTCTTCTTCCCCGGCGATCCCCAACCTCCCTCTCCCCTCTCCACCCTCAGAGACACCCGTGTCCCCAGTTCACTACGCCCGCTTCCTGGACTTCTTAAAGGCCCATTGGGCCCCACCGTTCACCCCAGACACTCTTCTCCACTTCCTGAAATCGAAGCTCCACCACCACCCCTCCTTCTCCCAATTCGACTTCCACCTCTTCACCTGGGCCTCCTCCCTCGACTCCTTCCACCACACCCACGCCACCTTCCACTGGATGGCCCGCACCCTCGCCGCCACCCATCGTTTCCCCCAGCTCCGTTCCCTCCTCCATCTCATCGCCACCCACCCCTGCCCTTGCTCTCCCTCCATCTTCTCCTGCCCCCACACCCAACCCATCTTCTCCCACGCCATTCACGCCTTCTCCAAATCCTCCCAACTCCACCACGCCCTCTCCGCATTCCACTCCATGACCAAACTCATCGACTCCAAGCCAGATGTCGTCGTTTTCAATGTCCTCATCCACGCCTTCGTCAAACGCGGCAACCTAACCCAAGCCCTCCAGTTTTACCGCGAGATGGTGGTTACTCACCGCGTTAAGCCTGATGTTTTCACCTTCAACATTTTGATCAGTGGTTACTGTCGGAACTCGCAGTTCGTCTTGGCGTTGGAGGTGTTTCACGAGATGGGGAAAGCGGGGTGTCAGCCCAATGTCGTGACTTTTAATACCTTGATTAGGGGGATGTTTAGAGAGGGGAGGGTTGAGGACGCCATTGGGATGGCTCGCGAGATGGTTCAATTAAGGTGTGAGCTTTCGTGTGTTACTTGTGAGATTTTAGTTCAAGGGCTTTGTAAGGAAGGGAGGGTTTTGCAGGCGTGTGAGTTGTTGCTGGAGTTTTCAGAAAAGGGGGTTTTGCCTGAGGGGTTTGATTGTTTTGCTTTGGTGGAGGTTTTGTGTGGGCAAGGGTGTGCTGTGAGAGCGTTGGAATTTGTTTATGAGTTGTGGAATGGGGGGAGTGTTCCGAGTTTGGTTGCTTGTATTGTTGTGGTTGATGGGTTGAGGGGGTTGGGGAAGATTGATGAGGTTCAGAGATTGGTGAAAAGGATGCTTGATGAGGGTATGGTGCTGGATGTTGTGACTTTCAATTGTGTTCTTCGGGATATTTGCGATGCACGGAGAACCGATGAGGCGAATAGATTGATGTTACTTGCTTTGGGCAAGGGTTTGGAACCAGATGACATGACTTATAGGATTTTGGTTATAGGGTACACGGAAGAGGGAGGGAGGGAGGAAGGAGAGTTACTGGTGAACGAAATGTTGGATATGGGCTTTATACCTGATCTTGCTTCATACAATAAGTTGATCAGTGGATTGTCTAATTGCAGGCGCTCTACAAGCCGTCAAGTAAACAAATTTGATCGCTGA | 1455 | 0.5189 | MATKKLVKARTLATPKPSSSPAIPNLPLPSPPSETPVSPVHYARFLDFLKAHWAPPFTPDTLLHFLKSKLHHHPSFSQFDFHLFTWASSLDSFHHTHATFHWMARTLAATHRFPQLRSLLHLIATHPCPCSPSIFSCPHTQPIFSHAIHAFSKSSQLHHALSAFHSMTKLIDSKPDVVVFNVLIHAFVKRGNLTQALQFYREMVVTHRVKPDVFTFNILISGYCRNSQFVLALEVFHEMGKAGCQPNVVTFNTLIRGMFREGRVEDAIGMAREMVQLRCELSCVTCEILVQGLCKEGRVLQACELLLEFSEKGVLPEGFDCFALVEVLCGQGCAVRALEFVYELWNGGSVPSLVACIVVVDGLRGLGKIDEVQRLVKRMLDEGMVLDVVTFNCVLRDICDARRTDEANRLMLLALGKGLEPDDMTYRILVIGYTEEGGREEGELLVNEMLDMGFIPDLASYNKLISGLSNCRRSTSRQVNKFDR | 484 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco2g02188 | 484 | Gene3D | Tetratricopeptide repeat domain | 366 | 482 | IPR011990 | GO:0005515 | |
| Phco2g02188 | 484 | Gene3D | Tetratricopeptide repeat domain | 228 | 365 | IPR011990 | GO:0005515 | |
| Phco2g02188 | 484 | Pfam | PPR repeat | 284 | 314 | IPR002885 | - | |
| Phco2g02188 | 484 | Gene3D | Tetratricopeptide repeat domain | 80 | 227 | IPR011990 | GO:0005515 | |
| Phco2g02188 | 484 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 422 | 456 | IPR002885 | - | |
| Phco2g02188 | 484 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 282 | 316 | IPR002885 | - | |
| Phco2g02188 | 484 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
| Phco2g02188 | 484 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 387 | 421 | IPR002885 | - | |
| Phco2g02188 | 484 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 212 | 246 | IPR002885 | - | |
| Phco2g02188 | 484 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 176 | 211 | IPR002885 | - | |
| Phco2g02188 | 484 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 247 | 281 | IPR002885 | - | |
| Phco2g02188 | 484 | Pfam | PPR repeat | 174 | 204 | IPR002885 | - | |
| Phco2g02188 | 484 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL | 66 | 476 | - | - | |
| Phco2g02188 | 484 | Pfam | PPR repeat family | 211 | 257 | IPR002885 | - | |
| Phco2g02188 | 484 | NCBIfam | pentatricopeptide repeat | 249 | 282 | IPR002885 | - | |
| Phco2g02188 | 484 | NCBIfam | pentatricopeptide repeat | 214 | 248 | IPR002885 | - | |
| Phco2g02188 | 484 | NCBIfam | pentatricopeptide repeat | 178 | 213 | IPR002885 | - | |
| Phco2g02188 | 484 | NCBIfam | pentatricopeptide repeat | 284 | 316 | IPR002885 | - |