Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02143 ATGGAAATGTCCGACAGAAGATCCAGCAACTACTCCCTCCTCAACCAAACGCCAGAGGACAACTTAACCGTTCGGTTGTTCGACTCTCCTTCCGGAGACGGTAAAAACAACAGAAGCAAGTTGGAGAGAGTCTCCGATTGGGACTCCGATCACAGACAGGGGAACAGGATCGGGAATTTGTACTCCTCTTTCGGGATGCAGCGACAGTCAAGTGGGAGCAGTTTCGGTGAGAGCTCACTCTCCGGCGAGTTTTACGCCCCCACTATGTCCACCGTGGCCCCCGAGGAGACTGATGAATTCAAATTTGGCGAGGTCAGAGGCAGGATTCCAGAGGCCGGGGCGGGGAAGAGCCGCGGTTCCTACGGCAAGAGCGGAGGTTCCTACAGCAATTCCTACAGCAAGAGCTGGGCGCAGCAGACTGAGGAGAGTTATCAGTTACAGCTGGCATTGGCTCTACGACTTTCCTCTGAGGCTACTTGTGCTGATGATCCCAATTTTCTGGATACCGTGCCCCATGAATCCTCTTCAAGGGCAACGTGTTCGGTAGAAACAGTGTCCCATAGGTTTTGGGTGAATGGCTGCCTATTATACTTCGACAAAATTCCTGATGGATTTTATCTAATTCATGGAATGGATCCGTATGTATGGACTTTGTGCACTGATCTGCAGGAAAGTGGCCGAATTCCTTCAATAGAGACACTAAAATCTATAGATCCTTCTTCTGAATCTTCACTTGAAGTAATTTTGGTGGATAGACTTTCTGATCCTATCTTAAAAGAATTGCAGAACAAGGTACATGACATTTTTTGTCGTAGCATATCAACAACATATGTTGTAGAACAGCTTGCAAAGCTTGTATTCGATTGTATGGGGGGTTCGGCTTCTGTACGGGAAGACAATCTTTTTCCCATATGGAGGAAGTGCATTAATGATCTAAGAGATCGCTTAGGATCTGTCGTTGTTCCTATTGGCAGCCTATCTACTGGACTTTGCAGGCATCGTGCTGTATTATTCAAAGTGCTAGCTGACACCATTGATTTACTGTGTCGAATTGCAAAGGGCTGTAAATATTGTTCAAGAGAAGATGCCTCATCATGTCTTGTTCGATTTGGCCCTGACAGGGAGTACATGGTTGATCTAATTGGAAAGCCGGGTTGCTTATGTGAGCCTGATTCCTTACTGAATGGTCCATCCTCCATCTCATTTTGTTCACCCTTGCACTTTCCAAGACTCAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAATATTTCTCGGATTGTGTGTCTACTGAGCTTGTCTTCGATAGTGGTGTTGCAGAACAGCATGAAAGGCAGTACAGGGACAGGAACCCTGGGCCAATTCCAAATGATAACAACAGAAGTTCTCTTGTTCCTCCACAACCACAAGCTTATCGTCCAAGTGCACATGATCGAGGCTCTGAAACATTTAAATCAGGTAACCCTCCACAGAATGTTGTAAAGCCGTCATTGACAAGCAAGGATTCATTGCCTTTAAAGCATAACCGTCCTGGTCATAGAGATACACAGACCAGATTACTGATTTCTAGCAAACCATCTAGAGAGTTTTCCCTAGATATGGAGGATCTGGACATTCCATGGACTGATCTTGTTTTGAAAGGGAGAATTGGATCAGGTTCTTTTGGAACTGTACATCAAGCTGAGTGGAATGGCTCGGAGGTTGCTGTGAAAATTCTGTTGGAACAAGACTTTGCAGGTGAACGCTTCCAGGAATTCTTGAGGGAGGTTGCAATAATGAAAAACTTACGGCATCCAAACATTGTTTTACTTATGGGTGCAGTCACCAAGCCTCCCAATTTATCAATTGTCACAGAATACTTGTCCAGGGGTAGCTTGTTCAGGCTGTTGCATAAACCTGGTGCCACAGAAATGTTGGATGAGAGACGTAGGATTAGTATGGCTTATGATGTGGCTAAGGGGATGAATTATCTTCATAAACGTAATCCTCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATATACAGTGAAGGTTAGTGATTTTGGGCTTTCCCGACTAAAGGCAAACACATTTCTCTCATCCAAGTCAGCTGCTGGGACACCTGAGTGGATGGCTCCAGAAGTTCTTCGTGATGAGCCATCCAATGAGAAGTCAGATGTTTACAGCTTTGGTGTCATCTTGTGGGAGCTCGCAACATTGCAACAGCCTTGGAGTAATTTGAATCCACCACAGGTTGTGGCAGCTGTTGGCTTTAAGGCAAAAAGACTTGAAATACCACGAGATTTAAATCCTCAATTAGCATCAATAATTGAGGCTTGCTGGGCCAATGAACCCTGGAAACGTCCTTCTTTTTCAAGTATTATGGATTCTTTGAAAGGATTGATCAAACCCCCTATACCTCAACCTGGCCGTCCAAACATGTCATTATCCATTTGA 2466 0.4493 MEMSDRRSSNYSLLNQTPEDNLTVRLFDSPSGDGKNNRSKLERVSDWDSDHRQGNRIGNLYSSFGMQRQSSGSSFGESSLSGEFYAPTMSTVAPEETDEFKFGEVRGRIPEAGAGKSRGSYGKSGGSYSNSYSKSWAQQTEESYQLQLALALRLSSEATCADDPNFLDTVPHESSSRATCSVETVSHRFWVNGCLLYFDKIPDGFYLIHGMDPYVWTLCTDLQESGRIPSIETLKSIDPSSESSLEVILVDRLSDPILKELQNKVHDIFCRSISTTYVVEQLAKLVFDCMGGSASVREDNLFPIWRKCINDLRDRLGSVVVPIGSLSTGLCRHRAVLFKVLADTIDLLCRIAKGCKYCSREDASSCLVRFGPDREYMVDLIGKPGCLCEPDSLLNGPSSISFCSPLHFPRLKPAEPTIDFRSLAKQYFSDCVSTELVFDSGVAEQHERQYRDRNPGPIPNDNNRSSLVPPQPQAYRPSAHDRGSETFKSGNPPQNVVKPSLTSKDSLPLKHNRPGHRDTQTRLLISSKPSREFSLDMEDLDIPWTDLVLKGRIGSGSFGTVHQAEWNGSEVAVKILLEQDFAGERFQEFLREVAIMKNLRHPNIVLLMGAVTKPPNLSIVTEYLSRGSLFRLLHKPGATEMLDERRRISMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVSDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWSNLNPPQVVAAVGFKAKRLEIPRDLNPQLASIIEACWANEPWKRPSFSSIMDSLKGLIKPPIPQPGRPNMSLSI 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02143 821 ProSitePatterns Protein kinases ATP-binding region signature. 553 574 IPR017441 GO:0005524
Phco2g02143 821 FunFam Serine/threonine-protein kinase isoform 1 537 625 - -
Phco2g02143 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 668 680 IPR008271 GO:0004672|GO:0006468
Phco2g02143 821 MobiDBLite consensus disorder prediction 443 520 - -
Phco2g02143 821 Pfam Protein tyrosine and serine/threonine kinase 548 801 IPR001245 GO:0004672|GO:0006468
Phco2g02143 821 FunFam Serine/threonine-protein kinase CTR1 626 811 - -
Phco2g02143 821 Gene3D Transferase(Phosphotransferase) domain 1 626 809 - -
Phco2g02143 821 Pfam Ethylene-responsive protein kinase Le-CTR1 182 388 - -
Phco2g02143 821 ProSiteProfiles Protein kinase domain profile. 547 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02143 821 MobiDBLite consensus disorder prediction 1 34 - -
Phco2g02143 821 CDD STKc_MAP3K-like 553 801 - -
Phco2g02143 821 SMART serkin_6 547 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02143 821 MobiDBLite consensus disorder prediction 484 507 - -
Phco2g02143 821 Gene3D Phosphorylase Kinase; domain 1 540 625 - -
Phco2g02143 821 MobiDBLite consensus disorder prediction 1 52 - -
Phco2g02143 821 SUPERFAMILY Protein kinase-like (PK-like) 524 800 IPR011009 -
Phco2g02143 821 PRINTS Tyrosine kinase catalytic domain signature 772 794 IPR001245 GO:0004672|GO:0006468
Phco2g02143 821 PRINTS Tyrosine kinase catalytic domain signature 621 634 IPR001245 GO:0004672|GO:0006468
Phco2g02143 821 PRINTS Tyrosine kinase catalytic domain signature 709 719 IPR001245 GO:0004672|GO:0006468
Phco2g02143 821 PRINTS Tyrosine kinase catalytic domain signature 728 750 IPR001245 GO:0004672|GO:0006468
Phco2g02143 821 PRINTS Tyrosine kinase catalytic domain signature 662 680 IPR001245 GO:0004672|GO:0006468
Phco2g02143 821 MobiDBLite consensus disorder prediction 456 472 - -
Phco2g02143 821 MobiDBLite consensus disorder prediction 35 52 - -
Phco2g02143 821 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 174 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02143 Phco-Chr2 52134103 52148195 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phco2g02143 PK_Tyr_Ser-Thr 4.4e-69 CL0016