Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02127 ATGATGGTTTTTGGAACTCGTTCTGCTCTTCGCCTTCCTCCCAAATCGCACTTGAACAATTTCAGTTCCTTCTTCTGCTCCCAATCACTCACACTCTGCGAATCCGACTCAAAATACCAGCGTCGCCTTAAAAAGGTTCAAAAACTCGAAGACTTACTCAACCGCGGTCGCACAATCACCGCGAGAAGGTTCCTCAAATCCCTTTTTCTCTCCAAAACCACATTCTCCTCTCTCTGCGAACTCCACGCCCACGTCTCTAAACCCCTCTTTTCGGACACTCTCTTATGGCTCTGCTCCGTTTCCAAAATGCTCAACGAAGCCACCGACTTGTACTTTTCAATGCGAAAAGACGGATTTCTCCCCTCCACGCGTTCCGTCAATCGTTTGCTCCGAACCCTGGTGGCTTCCCGACATTTCGAGAAAACCCTTTCTGTCTTCGCTGACGTTGTGGATTCTGATTTTCAGCCCGATGTCGTTACTTACGGGAAAGCTGTTCAGGCCGCGGTGATGTTGAAGGACCTCGATAAGGGTTTTGATTTGGTGAGTTCCATGGAAAAGGAAGGACTGGGTCCTTATGTTTTTGCTTATAACTTGATCTTGGGTGGGTTGTGTAAAGCCAGAAGGATCAAGGATGCTAGGAAACTGTTCGATGAAATGATTCGCAGAAATATTGCCCCGAATACTGTAACTTATAACACGCTCATTGATGGGTATTGTAAGGTGGGTGAGTTAGAGGAAGCTTTTGGCTTCAAGGAGAGGATGAAGGAGCTGAATGTGGAATGTAATCTTGTCACTTATAATTGCTTGTTAAGTGGCCTCTGTGGCTCCGGCAGGGTGGAAGATGCGAGGAAGGTGTTGTTAGAGATGGAGGGCTGTGGTTTTTTGCCTTGTGGGTTTTTGAGTGTGGTGTTTGATGGTCATTCGAATGTGGCAGGTGATCACGGTTTCTTTGATGGAAAAGAAATAATGATTGATGAGCGAACGTATTGTATTTTGTTGAATGGACTTTGCAGGGTTGGAAGGATTGAAAAGGCTGAAGAGGTTCTGGCCAAACTAGTGCATAATGGAGTTACTCCAAGTAAGATTTCATATAACATACTGGTGAATGCATATTGCGAAGAGGGTGACGTGAAGAAAGCTACACTGGCAATTGAACAAATGGAGGAGCGAGGGCTGCAGCCTAATCGCATAACTTTTAATACCCTCATTAGCAAGTTCTGCGAAACTGGGGAGGTGGACCAGGCAGAGGCGTGGGTTAAGAGGATGATAGAGAAGGATGTTTCCCCCACTGTGGAGACTTATAATTCGTTGATTCATGGTTATGGTCAGAGGGGCCATTTTGTCAGGTCTTTCGAGATTCTCGAGGAAATGGAGAAGGCGGGGATAAAGCCTAATGTCATCAGCTATGGTTCTCTAATAAATTGTCTTTGCAAAGATCGCAAGCTTCTTGATGCTGAGATTGTGCTAGCGGATATGATAGGTCGCGGGGTTTCTCCGAATGCAGAAATATATAATATGCTCATTGAAGCCAGTTTTTCACTAAGTAAATTGAAAGATGCTTTCAGATTTTTTGATGAAATGATGCGGGGTGGAATAGATGCAACTCTTGTGACATACAATACGATGATAAATGGACTCGGAAGAAATGAAAGGGTGAAGGAAGCTGAGGATTTGGTTCTGCAAATGGTAGGCAAGGGCTGTAATCCAGATGTAGTAACATACAATTCTTTGATCTCAGGATATGCCAAGTCAGTAAACACCAAGAAATGTATTGAATTGTATGATAAGATGAAGATGGTAGGCATAAAGCCTACAATTGGGACTTTTCATCCTTTGATCTATGCGTGCAGGAAGGTAGGCTTGGCGGAAGTGGAGGGAATGTTTCAGGAATTGCTACAAATGGATTTGATTCCCGATCGACATGTTTATAATGAAATGATTTACAGTTATGCTGAAGATGGAAATGTTCTGAAGGCAGTGTCTTTGCACCAACAGATGCTTGATCAGGGAGTTGATCCGGACAAGGTGACTTACAATTGCTTGATTCTAGCATATCTTAGAGATAGAAGGGTTTCAGAAATAAAGCATATTGTTGATGATATGAAGGCTAAAGGACTGGTTCCAAAAGCTGATACTTATAACATTCTGGTTAAGGGACATTGTGACTTAAAAGATTTCAATGGTGCATACTTTTGGTATAGGGAAATGACTGACGGGGGTTTGCTTTTAAATTCCCGCATGTGCTCCCTGCTAATTTCTGGTCTAAGAGAGGAGGAAATGCTTCCGGAGGCCCAAATTGTATCCTCAGAATTGAGTAGTAGGACTGAATAA 2331 0.435 MMVFGTRSALRLPPKSHLNNFSSFFCSQSLTLCESDSKYQRRLKKVQKLEDLLNRGRTITARRFLKSLFLSKTTFSSLCELHAHVSKPLFSDTLLWLCSVSKMLNEATDLYFSMRKDGFLPSTRSVNRLLRTLVASRHFEKTLSVFADVVDSDFQPDVVTYGKAVQAAVMLKDLDKGFDLVSSMEKEGLGPYVFAYNLILGGLCKARRIKDARKLFDEMIRRNIAPNTVTYNTLIDGYCKVGELEEAFGFKERMKELNVECNLVTYNCLLSGLCGSGRVEDARKVLLEMEGCGFLPCGFLSVVFDGHSNVAGDHGFFDGKEIMIDERTYCILLNGLCRVGRIEKAEEVLAKLVHNGVTPSKISYNILVNAYCEEGDVKKATLAIEQMEERGLQPNRITFNTLISKFCETGEVDQAEAWVKRMIEKDVSPTVETYNSLIHGYGQRGHFVRSFEILEEMEKAGIKPNVISYGSLINCLCKDRKLLDAEIVLADMIGRGVSPNAEIYNMLIEASFSLSKLKDAFRFFDEMMRGGIDATLVTYNTMINGLGRNERVKEAEDLVLQMVGKGCNPDVVTYNSLISGYAKSVNTKKCIELYDKMKMVGIKPTIGTFHPLIYACRKVGLAEVEGMFQELLQMDLIPDRHVYNEMIYSYAEDGNVLKAVSLHQQMLDQGVDPDKVTYNCLILAYLRDRRVSEIKHIVDDMKAKGLVPKADTYNILVKGHCDLKDFNGAYFWYREMTDGGLLLNSRMCSLLISGLREEEMLPEAQIVSSELSSRTE 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02127 776 Gene3D Tetratricopeptide repeat domain 415 514 IPR011990 GO:0005515
Phco2g02127 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 157 191 IPR002885 -
Phco2g02127 776 Pfam PPR repeat 258 290 IPR002885 -
Phco2g02127 776 Pfam PPR repeat 322 350 IPR002885 -
Phco2g02127 776 Pfam PPR repeat 495 527 IPR002885 -
Phco2g02127 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 192 226 IPR002885 -
Phco2g02127 776 NCBIfam pentatricopeptide repeat 676 708 IPR002885 -
Phco2g02127 776 NCBIfam pentatricopeptide repeat 362 395 IPR002885 -
Phco2g02127 776 NCBIfam pentatricopeptide repeat 229 262 IPR002885 -
Phco2g02127 776 NCBIfam pentatricopeptide repeat 328 360 IPR002885 -
Phco2g02127 776 NCBIfam pentatricopeptide repeat 467 501 IPR002885 -
Phco2g02127 776 NCBIfam pentatricopeptide repeat 712 744 IPR002885 -
Phco2g02127 776 NCBIfam pentatricopeptide repeat 642 674 IPR002885 -
Phco2g02127 776 NCBIfam pentatricopeptide repeat 264 296 IPR002885 -
Phco2g02127 776 NCBIfam pentatricopeptide repeat 195 228 IPR002885 -
Phco2g02127 776 NCBIfam pentatricopeptide repeat 572 605 IPR002885 -
Phco2g02127 776 NCBIfam pentatricopeptide repeat 503 532 IPR002885 -
Phco2g02127 776 NCBIfam pentatricopeptide repeat 397 431 IPR002885 -
Phco2g02127 776 NCBIfam pentatricopeptide repeat 537 571 IPR002885 -
Phco2g02127 776 NCBIfam pentatricopeptide repeat 433 466 IPR002885 -
Phco2g02127 776 SUPERFAMILY TPR-like 195 426 IPR011990 GO:0005515
Phco2g02127 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 535 569 IPR002885 -
Phco2g02127 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 709 743 IPR002885 -
Phco2g02127 776 Pfam PPR repeat family 360 407 IPR002885 -
Phco2g02127 776 Pfam PPR repeat family 192 240 IPR002885 -
Phco2g02127 776 Pfam PPR repeat family 536 583 IPR002885 -
Phco2g02127 776 Pfam PPR repeat family 673 721 IPR002885 -
Phco2g02127 776 Pfam PPR repeat family 429 478 IPR002885 -
Phco2g02127 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 465 499 IPR002885 -
Phco2g02127 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 227 261 IPR002885 -
Phco2g02127 776 Gene3D Tetratricopeptide repeat domain 316 414 IPR011990 GO:0005515
Phco2g02127 776 Gene3D Tetratricopeptide repeat domain 227 306 IPR011990 GO:0005515
Phco2g02127 776 Gene3D Tetratricopeptide repeat domain 515 622 IPR011990 GO:0005515
Phco2g02127 776 Gene3D Tetratricopeptide repeat domain 89 226 IPR011990 GO:0005515
Phco2g02127 776 Gene3D Tetratricopeptide repeat domain 623 775 IPR011990 GO:0005515
Phco2g02127 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 360 394 IPR002885 -
Phco2g02127 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 430 464 IPR002885 -
Phco2g02127 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 395 429 IPR002885 -
Phco2g02127 776 PANTHER MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE 628 770 - -
Phco2g02127 776 Pfam PPR repeat 642 671 IPR002885 -
Phco2g02127 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 639 673 IPR002885 -
Phco2g02127 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 500 534 IPR002885 -
Phco2g02127 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 325 359 IPR002885 -
Phco2g02127 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 570 604 IPR002885 -
Phco2g02127 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 674 708 IPR002885 -
Phco2g02127 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 262 296 IPR002885 -