Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02119 ATGGAACCCAATGCATTAGGTGGTGGAATATTTCCTAACATAAGTAGTGGTTTGCTAGGAGTAGAAAACCTTCAAAACCTTCAAAACCAGCAAAACCCTCCTCACCCTTTGCACCACCCCCAAATGGTTTCCTATGCCTCTCACCATGACACTGACACACATCAACAACATCCACCACAATCAATCAAACATGGCTACAACTATTCTGCTGCGAAAACCAACAAGTTACAAATCACACTCAGTGATGAAGATGAGGCCGGGTTCACAGCAGAAGACTCTGGTGACCCCAAGAGAAAAATTTCTCCATGGCATAGAATGAAGTGGACTGACACCATGGTAAGGCTTCTAATAATGGCTGTTTATTACATTGGAGATGAGGCTGGCTCAGAAGGCACTGATCCCACTAAGAAGAAAGCCACGGGGTTGCTGCAGAAGAAAGGGAAATGGAAATCAGTGTCAAGGGGCATGATGGAAAAGGGCTACTATGTATCTCCGCAACAATGTGAAGACAAATTCAATGACTTGAACAAGAGGTACAAGAGGGTCAACGACATTCTGGGCAAGGGCACAGCTTGTCGGGTGGTGGAGAACCAAACCTTGTTGGACACAATGGATCTGTCCCCAAAGATGAAGGAGGAAGTTCGAAAACTGCTCAACTCCAAGCACTTGTTCTTCAGGGAAATGTGTACCTACCACAACAGTTGTGGTCACAACAACAACTGTGGCACATCCAACGTGCAACAATCAAGTGAGGCTCAGCCACAACATCAACATCAACATCAACAGCAGCGGTGTTTGCATTCATCGGAGAACGGGGTGGGGGGTCTGAGAATGTTGAAAGAGGATGAGGATGAGGATATTGAGGAGGAGGATTCGGAGGATTTTTCTGATGAGGAGGAAGATGAATCGGGAGAAGGAGGATCAAGGGGTATGGAGGAGGATGAGAATGATGTGATGAGGAAGAGAGCGAGGAAAGGAGGGTTTGGTGTGTTGTCATCCTCATCATCAATATCATCTCAGGTGATGATGCAGCAATTGAATGGCGAAGTGAGCGGTGTGTTGCAAGATGTTGGGAAGAGTGCATGGGAGAAAAAGCATTGGATGAAGAAGAGGGTGGTGCAGTTGGAGGAGCAGCAGGTGAGTTATCAAATGCAGGCGTTTGAATTGGAAAAGCAACGGTTGAAGTGGGAGAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGAGAGATAAGCTTCAGAATGAACGGAGGAGGCTGGAAATAGAGAGAATGGTCTTGCTAATTCACCAGAAGGAGCTTGAACTGGTTACTGTTCATCAACAGCAGCAGCATCAACAGCAGCATTCTTCTACCTAG 1356 0.4646 MEPNALGGGIFPNISSGLLGVENLQNLQNQQNPPHPLHHPQMVSYASHHDTDTHQQHPPQSIKHGYNYSAAKTNKLQITLSDEDEAGFTAEDSGDPKRKISPWHRMKWTDTMVRLLIMAVYYIGDEAGSEGTDPTKKKATGLLQKKGKWKSVSRGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQTLLDTMDLSPKMKEEVRKLLNSKHLFFREMCTYHNSCGHNNNCGTSNVQQSSEAQPQHQHQHQQQRCLHSSENGVGGLRMLKEDEDEDIEEEDSEDFSDEEEDESGEGGSRGMEEDENDVMRKRARKGGFGVLSSSSSISSQVMMQQLNGEVSGVLQDVGKSAWEKKHWMKKRVVQLEEQQVSYQMQAFELEKQRLKWERFSSKKEREMERDKLQNERRRLEIERMVLLIHQKELELVTVHQQQQHQQQHSST 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02119 451 MobiDBLite consensus disorder prediction 282 308 - -
Phco2g02119 451 MobiDBLite consensus disorder prediction 244 269 - -
Phco2g02119 451 MobiDBLite consensus disorder prediction 244 317 - -
Phco2g02119 451 PANTHER F16F4.11 PROTEIN-RELATED 1 438 - -
Phco2g02119 451 Pfam Myb/SANT-like DNA-binding domain 105 229 IPR044822 -
Phco2g02119 451 Coils Coil 372 392 - -
Phco2g02119 451 Coils Coil 402 422 - -
Phco2g02119 451 Gene3D - 108 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02119 Phco-Chr2 51967728 51969083 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phco2g02119 Myb_DNA-bind_4 1.3e-21 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02119 2 51967728 51969083 Phco2g02119 2 51967728 51969083 ECH
Phco2g02119 2 51967728 51969083 Phco6g00594 6 5848039 5849442 PCT