Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02110 ATGATAGCTGAATCAAACATGAGACCCTGCTTCCATTTTTACTATTCCTATACCTTTCTTCTTCTTTTCCTTCTCCTTGCCCATCACACTACTTCACAGAAGACATGTCCAAACTGTGGCTCTATGCAAGTTCCATACCCTTTGAGTACACATCCAAGTTGTGGTGATCCATACTACAAGCTTCGCTGTGATTCCCACTCTCAAAGGCTTTACTTCGACACCCTCAATGGAAGTTCCTATCTCCTTCTGCGAATCATGCCTTCAATCCAGCGCATGGTGGTAGAGCCATCACCTTGGTTACCAGGTTCGTGTGTTACACAAGACATGCCAAGAAGCAATGGTATATGGTTGAACCAGTCACTTCCTTTCAATATAACTTCATCCAATACAGTGTTCCTCCTTAATTGCTCCCCACGCCTCTTGGTTTCTCCTCTTAACTGCACTTCTTCTAGTGTTTGCCATCGTTACTTGGGGAGTTCAGGTCATGTTGACACAAAGCGAGCACTTGAGTGTGCAAGTGGTCTTCACCCTTGTTGCACTTTTCTAGCTGGTGGGATACCTTCAGCTTACAGGATCAGGCTTCATGATTCTGGCTGTAAAGCATTCAGAAGCATCCTTCATTTGAACCAAGACAAGCCTCCTGATCAGTGGGAGGAAGGGCTTGAAATTCAATGGGCTCCTCCACCTGAACCAGTGTGCAGGACACAAACGGATTGCTCTGGAGACTCTACGTGTTCCCCTTCTGGTAGAAATGGCTTATTTCGCTGCCTTTGTGATGCGGGACACCGTTGGGACCCTTTTTTCACAACGTGTGTGAGGTATGAGAGAAAACCCAAATGGAAAACCAGCTTGGTGGTCTCAATAGGGGTTGTTGTTACTTTTTTCTCTCTTCTTGTTGTTCTGACCATCATCACAAAGTCCCGCAAAATCTCAACCTATAGAGATAACAAAGCGAAGGAAAGAGAAGACAAGCTGAAATCAAGTGCTGGGGAGAAGCCTTGTAGGATGTTTCAACTGAAAGAGGTGAAGAAAGCAACAAATGGTTTTTCCCAACAGAGGTTCTTGGGGAGTGGTGGCTTTGGGGAAGTTTACAAAGGTGAGCTACAAGATGGAACATTAGTGGCAGTGAAGAAAGCTAGAGTGGGAAACCTGAAAAGCACCCAACAAGTGCTTAATGAAGTTGCAATACTTTCTCAAGTCAATCACAAGAACTTGGTCAGGCTCTTGGGGTGCTGTGTGGAATCTGAGCTACCATTTATGATCTACGAGTATATCTCAAATGGGACCCTCTATGACCATCTTCATGGTAGGTATTGTTCCAACTTTCTAAACTGGAAAACAAGGCTCAAGGTTGCTTTTCAAACTGCAGAAGCATTGGCCTACCTGCATTCTGCTGCACACACTCCCATCTACCATAGAGACGTTAAGTCAACAAACATACTATTGGATGATGATTTCAATGCCAAGGTCTCAGATTTTGGACTCTCCAGATTGGCTAGCCCGGGACTCAGTCACGTGTCAACATGTGCTCAGGGAACGTTGGGGTATTTGGATCCTGAATACTACCGCAACTACCAGTTAACAGATAAAAGTGATGTTTATAGCTATGGGGTTGTGCTGCTAGAGCTTTTGACTTCGCAGAAAGCGATTGACTTCAATCGTGATGAAGATGATGTTAACCTAGCAATTCATGTGAATCAACGTGCGAGCAATGGTAATATCATGGAATTGGTGGATCAAAGGCTTCTTTCCGTGGAGACCTTGGAGGATAAAATCTTGACAAGCATAAAACTCTTCTTGGAGCTTGCACTTGAATGTCTTAGAGAGAAGAAAGGTGAAAGGCCTAATATGAAGGATATTGTTCAACGCCTAGTGTGTATAATTAGGATTGTAGAACAAGAGTGA 1905 0.4409 MIAESNMRPCFHFYYSYTFLLLFLLLAHHTTSQKTCPNCGSMQVPYPLSTHPSCGDPYYKLRCDSHSQRLYFDTLNGSSYLLLRIMPSIQRMVVEPSPWLPGSCVTQDMPRSNGIWLNQSLPFNITSSNTVFLLNCSPRLLVSPLNCTSSSVCHRYLGSSGHVDTKRALECASGLHPCCTFLAGGIPSAYRIRLHDSGCKAFRSILHLNQDKPPDQWEEGLEIQWAPPPEPVCRTQTDCSGDSTCSPSGRNGLFRCLCDAGHRWDPFFTTCVRYERKPKWKTSLVVSIGVVVTFFSLLVVLTIITKSRKISTYRDNKAKEREDKLKSSAGEKPCRMFQLKEVKKATNGFSQQRFLGSGGFGEVYKGELQDGTLVAVKKARVGNLKSTQQVLNEVAILSQVNHKNLVRLLGCCVESELPFMIYEYISNGTLYDHLHGRYCSNFLNWKTRLKVAFQTAEALAYLHSAAHTPIYHRDVKSTNILLDDDFNAKVSDFGLSRLASPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFNRDEDDVNLAIHVNQRASNGNIMELVDQRLLSVETLEDKILTSIKLFLELALECLREKKGERPNMKDIVQRLVCIIRIVEQE 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02110 634 Gene3D Transferase(Phosphotransferase) domain 1 425 633 - -
Phco2g02110 634 ProSiteProfiles Protein kinase domain profile. 349 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02110 634 SMART serkin_6 349 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02110 634 Pfam Protein kinase domain 350 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02110 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Phco2g02110 634 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Phco2g02110 634 SUPERFAMILY Protein kinase-like (PK-like) 327 625 IPR011009 -
Phco2g02110 634 CDD STKc_IRAK 355 624 - -
Phco2g02110 634 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 19 627 IPR044652 GO:0004672
Phco2g02110 634 Gene3D Phosphorylase Kinase; domain 1 309 424 - -
Phco2g02110 634 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 322 424 - -
Phco2g02110 634 FunFam Wall-associated receptor kinase-like 20 425 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02110 Phco-Chr2 51884931 51886835 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phco2g02110 Pkinase 2.7e-47 CL0016