Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02041 ATGGATGGGCAAATTGGTTATCTGAATCCGTCTGACTTTTTTAGCTTTTGTTGGGGTCAGTCAGCAGCCATGAAGTGTTTTACATTCTCCTATGGAGAGAAGAAAGATGAGCCAAAAGGCTTTAGGTCAACATCGGGCCGGTCAGAGAATTCCACGTGTGCTGATATTAGAAGATCTGGTTCCGAGTTAAATTCTCAAGAAGTTTCAGGCAGTGGCAGTACAGAATCCCTCAGGAGGAATGCAATACCCAGTTTGTCCCAGAGGCCCAGCAACCTCAGAGTTTTTACTGTTTCTGAACTGAAATCAGCCACAAGGAATTTCAGTCGCTCTGTTAAGATTGGAGAGGGCGGGTTTGGGTGTGTCTTCCTCGGATTGATTAAGAGTGTGGAGGTACCCTCCGGAAGAATTGAAGTTGCAGTTAAACAGCTTAGTAAAAGGGGAATGCAGGGCCACAGGGAATGGGTGACAGAAGTGAATGTTCTGGGCGTTGTTGAGCATCCGAATCTTGTGAAACTAGTGGGTTATTGTGCAGAAGATGATGAAAGAGGAATCCAGCGGCTTCTGATTTATGAATACATGCCAAACAGAAGTGTGGAACACCATTTATCCCACCGATCAGAGGCTCCTCTTTCATGGAGTAGGAGATTGAAAATAGCTCGAGATGCAGCTCGTGGATTAACATACCTGCATGAAGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTTTGGATGAACAATGGAGTGCAAAGCTGTCAGACTTTGGGTTGGCAAGGTTGGGACCATCAGATGGACTTACTCATGTCTCAACTGCGGTTGTGGGAACAATGGGATATGCATCTCCGGAATATATTCAAACTGGACGTCTAACATCAAAGAATGATGTGTGGAGCTACGGTGTCTTCCTTTATGAACTCATCACCGGTAGGCGCCCTTTAGATCGAAATCGCCCCAGGGGTGAGCAGAAGCTCTTGGAATGGATAAGACCATACCTATCCGATGTGAAGAAATTTCAACTAATATTAGACCCAAGACTTGATAAGAAACAAATCTTCAAATCAGCACATAGACTTGCTATGATAGCAAACCGATGCTTGGTAAAAAATCCAAAGAATCGCCCAAAGATGAGTGAGGTATTGGAAATGGTGAATGGGATGGTAGAATCTTCTTCATCCTGTTCTAGTTCACAATTGCCCTTGAGGAGTGTGGCAAGAGTGGAAACTTCCCAGGATACTGAAACAAATAACAAGAAACGGACCATGGATCAGAAGCCTGGAGAAAGTAATTGGTTTGTTAGGATGTGGAGACCAAAGCTTGTAAGAACATGTTGA 1347 0.4358 MDGQIGYLNPSDFFSFCWGQSAAMKCFTFSYGEKKDEPKGFRSTSGRSENSTCADIRRSGSELNSQEVSGSGSTESLRRNAIPSLSQRPSNLRVFTVSELKSATRNFSRSVKIGEGGFGCVFLGLIKSVEVPSGRIEVAVKQLSKRGMQGHREWVTEVNVLGVVEHPNLVKLVGYCAEDDERGIQRLLIYEYMPNRSVEHHLSHRSEAPLSWSRRLKIARDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWSAKLSDFGLARLGPSDGLTHVSTAVVGTMGYASPEYIQTGRLTSKNDVWSYGVFLYELITGRRPLDRNRPRGEQKLLEWIRPYLSDVKKFQLILDPRLDKKQIFKSAHRLAMIANRCLVKNPKNRPKMSEVLEMVNGMVESSSSCSSSQLPLRSVARVETSQDTETNNKKRTMDQKPGESNWFVRMWRPKLVRTC 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02041 448 MobiDBLite consensus disorder prediction 44 82 - -
Phco2g02041 448 ProSiteProfiles Protein kinase domain profile. 107 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02041 448 MobiDBLite consensus disorder prediction 409 432 - -
Phco2g02041 448 SUPERFAMILY Protein kinase-like (PK-like) 84 388 IPR011009 -
Phco2g02041 448 CDD STKc_IRAK 113 391 - -
Phco2g02041 448 Gene3D Phosphorylase Kinase; domain 1 87 192 - -
Phco2g02041 448 ProSitePatterns Protein kinases ATP-binding region signature. 113 141 IPR017441 GO:0005524
Phco2g02041 448 FunFam Serine/threonine-protein kinase BIK1 74 192 - -
Phco2g02041 448 Gene3D Transferase(Phosphotransferase) domain 1 193 411 - -
Phco2g02041 448 MobiDBLite consensus disorder prediction 35 82 - -
Phco2g02041 448 FunFam Serine/threonine-protein kinase PCRK2 193 402 - -
Phco2g02041 448 Pfam Protein tyrosine and serine/threonine kinase 111 386 IPR001245 GO:0004672|GO:0006468
Phco2g02041 448 PANTHER OS01G0588500 PROTEIN-RELATED 68 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02041 Phco-Chr2 51135990 51140668 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco2g02041 PK_Tyr_Ser-Thr 7.1e-47 CL0016