Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02034 ATGTTAAGAAGAAGAAACCCAGCAAAGAGTCAAGTTCAAAGACAAAGAAAAACTCGAGAAGCTCGGCTTTGCAACATTTCCATCATCACTGCCACAACCACCGCCTCTGTTGGCGCCGCCACTCTTCCCCATTGCACGTGTCATCCACCACTGGAAGAACCTCTTCTTGGACGACGCCAAGTATCAGGTCATGTGATCCACACATTTCTTTACACGGACTTACTATTCATATTTGCACGTGATTTCCCTTTGATTCCATATAAAGAAATCCTCAACACACATCAACATTTCCTCACTCTCTCTCTCTCGACACAAAACTCACATCCATTTTTTCATTCTCTTCATTTTATCAAGATGGAAGCAACTACCCTTACCAACGCCCACCAAAACGGTTCCTTCTGCTTGTCCGCCAAGACCACTGATCCGCTCAATTGGGGAACGGCCGCGGAGGCTCTCAAGGGGAGCCACCTCGACGAGGTCAAGCGCATGGTGGCCGAATACCGGCAGCCGCTGGTCCGCCTCGGCGGCGAGACGCTCACCATCGCTCAGGTGGCAGCAGTGTCTGGACACGACCAAGGCGTGAGGGTGGAGCTGTCGGAGTCCGCTAGGGAAGGTGTTAAGGCGAGCAGTGAGTGGGTGATGAGCAGCATGAACAATGGCACTGACAGTTACGGCGTCACCACCGGCTTCGGTGCCACCTCACACCGTCGAACCAAACAAGGTGGTGCTCTGCAGAAAGAACTCATCAGGTTTTTAAACGCTGGAATATTTGGAAATGGAACTGAATCATGCCACACACTGCCACACACTGCAACCAGAGCAGCCATGTTAGTGAGGATCAACACTCTTCTTCAAGGCTACTCAGGCATCAGATTTGAAATCTTAGAATCCATCACCAAGCTCCTTAACAACAACGTTACCCCATGTTTGCCACTTCGTGGTACAATCACAGCTTCTGGAGATCTTGTTCCACTTTCCTATATTGCCGGTTTGCTCACTGGCAGACCTAACTCCAAAGCTGTTGGACCTTCTGGAGAAGTACTTAATGCTAAGCAAGCTTTTGAATTGGCTAACATCAATTCTGAGTTCTATGAATTGCAACCCAAGGAAGGCCTTGCCCTTGTTAATGGCACGGCTGTCGGTTCTGGCATGGCTTCTATTGTTCTCTTTGAGGCAAATATACTAGCTGTGTTGTCTGAAGTTCTATCAGCTATTTTTGCCGAAGTGATGCAAGGGAAACCTGAGTTTACTGATCATTTGACACACAAGTTAAAGCACCACCCTGGTCAAATTGAGGCTGCTGCCATTATGGAGCACATTTTGGATGGAAGTTCCTACATGAAGGATGCTAAGAAGCTGCATGAAATAGATCCGTTGCAGAAGCCAAAACAAGATAGATATGCCCTCAGAACTTCACCACAGTGGCTTGGTCCTCTCATTGAAGTCATTCGTTTCTCCACCAAGTCAATTGAGAGAGAGATCAACTCTGTGAATGACAACCCTCTTATTGATGTTTCAAGGAACAAGGCATTGCATGGTGGTAATTTCCAAGGAACCCCAATTGGAGTCTCCATGGACAACACTCGTTTGGCTCTTGCATCTATCGGCAAACTCATGTTTGCTCAATTCTCCGAGCTTGTCAATGATTTTTACAACAACGGTCTGCCTTCAAATCTCACTGCTAGCAGAAATCCTAGCTTGGATTATGGTTTCAAGGGAGCTGAAATTGCCATGGCTTCCTATTGCTCTGAACTCCAGTATCTGGCAAATCCAGTAACAAGCCATGTCCAAAGTGCCGAGCAACACAACCAAGATGTGAACTCTTTGGGTTTGATTTCAGCTAGGAAGACAAATGAATCTATTGAGATCCTTAAGCTCATGTCTTCCACATTCTTGATGGGACTTTGCCAAGCAATTGACTTGAGGCATTTGGAGGAGAATTTGAAAAGCTCGGTCAAGAACACTGTGAGTCAAGTTTCCAAGAGGACTCTTACCACAGGTGGCAACGGAGAACTCCATCCTTCAAGATTTTGCGAAAAGGATCTGCTGAAAGTGGTTGATAGGGAGTATGTATTTTCCTACATAGATGACCCATGCAGTGCTACATACCCACTGATGCAGAAACTTAGGCAAGTGCTTGTAGACCATGCCTTGATAAATGCAGAGAATGAGAAGGATGTTAACACATCAATCTTTCAAAAGATTGCAACCTTTGAGGAGGAGTTGAAGAGCATCTTGCCAAAGGAGGTTGAAAGTACAAGGGCTGCTTATGAGAGTGGGAAAGCTGCAATTCCTAACAAGATAAAAGAATGCAGATCTTACCCACTGTACAAGTTTGTGAGAGAGGAGTTAGGGACTGGGTTGCTAACTGGAGAAAAGGTCAAGTCACCAGGTGAAGAGTTTGACAAATTATTCACAGCAATATGCCAGGGCAAAATTATTGATCCTCTTCTCGAATGCCTTGGAGAGTGGAATGGAGCTCCTCTTCCAATTTGTTGA 2499 0.4606 MLRRRNPAKSQVQRQRKTREARLCNISIITATTTASVGAATLPHCTCHPPLEEPLLGRRQVSGHVIHTFLYTDLLFIFARDFPLIPYKEILNTHQHFLTLSLSTQNSHPFFHSLHFIKMEATTLTNAHQNGSFCLSAKTTDPLNWGTAAEALKGSHLDEVKRMVAEYRQPLVRLGGETLTIAQVAAVSGHDQGVRVELSESAREGVKASSEWVMSSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESCHTLPHTATRAAMLVRINTLLQGYSGIRFEILESITKLLNNNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEVLNAKQAFELANINSEFYELQPKEGLALVNGTAVGSGMASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKDAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISARKTNESIEILKLMSSTFLMGLCQAIDLRHLEENLKSSVKNTVSQVSKRTLTTGGNGELHPSRFCEKDLLKVVDREYVFSYIDDPCSATYPLMQKLRQVLVDHALINAENEKDVNTSIFQKIATFEEELKSILPKEVESTRAAYESGKAAIPNKIKECRSYPLYKFVREELGTGLLTGEKVKSPGEEFDKLFTAICQGKIIDPLLECLGEWNGAPLPIC 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02034 832 FunFam Phenylalanine ammonia-lyase 645 766 - -
Phco2g02034 832 Pfam Aromatic amino acid lyase 179 654 IPR001106 -
Phco2g02034 832 SUPERFAMILY L-aspartase-like 141 832 IPR008948 GO:0003824
Phco2g02034 832 CDD PAL-HAL 177 642 IPR001106 -
Phco2g02034 832 FunFam Phenylalanine ammonia-lyase 379 689 - -
Phco2g02034 832 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 314 330 IPR022313 GO:0016841
Phco2g02034 832 Gene3D Fumarase/aspartase (Central domain) 379 827 - -
Phco2g02034 832 PANTHER HISTIDINE AMMONIA-LYASE 131 832 IPR001106 -
Phco2g02034 832 NCBIfam phenylalanine ammonia-lyase 141 821 IPR005922 GO:0005737|GO:0006559|GO:0016841
Phco2g02034 832 Gene3D - 133 378 IPR024083 -
Phco2g02034 832 Gene3D - 645 766 IPR023144 -
Phco2g02034 832 FunFam Phenylalanine ammonia-lyase 133 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02034 Phco-Chr2 51061421 51072005 Tandem