Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02030 ATGGAGACACGGTGCGAGATAACGCATTCAAAGTTCAACAGGATTTGTGTGTTCTGTGGAAGTAGCCCTGGCAAGAAGAGTAGCTATCAAGATGCTGCCATTGAGCTCGGCAATGAACTGGTCTCAAGGAACATCGATCTGGTGTATGGAGGGGGAAGCATTGGTCTAATGGGTTTAGTTTCTCAAGCTGTTCATGATGGCGGTCGCCATGTCATTGGAGTTATTCCCAAGACGCTCATGCCTCGAGAGCTAACTGGTGAAACTGTGGGAGAAGTAAAAGCTGTTGCTGATATGCACCAAAGGAAGGCAGAGATGGCCAAACATTCAGATGCCTTTATTGCCTTACCAGGAGGATATGGGACTCTAGAGGAGCTTCTTGAAGTCATAACCTGGGCACAACTTGGGATTCATGACAAGCCGGTGGGATTAGTAAATGTTGATGGATACTTTAATTCCTTGCTGTCATTTATTGACAAAGCCGTGGAAGAGGGATTTATCAGTCCAAATGCTCGTCACATAATTGTATCAGCACCAACAGCAAAGGAGTTGGTGAAGAAATTGGAGGATTACGTTCCCTGTCATGAGGGTGTTGCTTCCAAATTGAGCTGGCAGATAGAACAGCAGCTTGCATATCCTCAAGATTATGACATGTCAAGGTAG 660 0.4561 METRCEITHSKFNRICVFCGSSPGKKSSYQDAAIELGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISPNARHIIVSAPTAKELVKKLEDYVPCHEGVASKLSWQIEQQLAYPQDYDMSR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02030 219 NCBIfam Rossman fold protein, TIGR00730 family 14 190 IPR005269 GO:0009691|GO:0016787
Phco2g02030 219 SUPERFAMILY MCP/YpsA-like 11 190 - -
Phco2g02030 219 PANTHER LOG FAMILY PROTEIN YJL055W 7 215 - -
Phco2g02030 219 FunFam CASP-like protein 3 189 - -
Phco2g02030 219 Gene3D - 3 189 - -
Phco2g02030 219 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02030 Phco-Chr2 51002831 51006723 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02030 2 51002831 51006723 Phco10g00231 10 1978017 1982009 ECH
Phco2g02030 2 51002831 51006723 Phco2g02030 2 51002831 51006723 ECH