Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02017 ATGTTCATATTCATGGACAAAGATGCTAATTTAGAAATCCAACTCCCTCCTGGATTTAGATTCCACCCTTCTGACGAAGAGCTAATTGTTCACTATCTGAGAAACAAAGTGACATCATCACCCCTTCCCGGCTCATTCATAGCAGAAATAGATCTTTACAAGTATAATCCATGGGAGCTCCGAAGTAAAGCTTTGTTTGGGGAGGATGAATGGTATTTCTTTACTCCCAGGGACAGGAAGTATCCCAATGGAGTGAGGCCTAATAGAGCAGCTGCTTCTGGTTATTGGAAGGCTACTGGGACTGACAAACCCATTTTTACTTCATGTGGGATGAAGAATATTGGAGTGAAGAAGGCCCTAGTGTTCTACATGGGTCGCGCACCAAAAGGTTCTAAAACTGATTGGATCATGCACGAGTACAGGTTGCAGAATTCCATGAACTCCATTCCACAGCAAAGAGGGTCCATGAGACTGGGTGAGTGGGTGCTGGTGCCGGGTCCGACAGAAAATGGCAGCACAAGAAGCATCTGGGAAGACTCAAATGAATCTATTCATGAACCAACACGCCACTTTCGAGAAATGAATGAGAACTCAAATCCTGAACCAGCCAAAAATTGTATTGGCATAGCCTCAGGCTCAGGCTTTGGTTGTAATAATGATGTAAAAGCATATGCTTCATGGCATGATGACAACTCGAACATAGTAATTGGAGCACAGTTTATGGCACCTGTAACTGAGGGCTTGTTTAATCCACTGAAGAAAAAAAACATTGAAGAGAACGATCACTTAGACTTGCTCAATAAAAAACTAAGCGAAGAAGTTGATGTTGGGAAACAAGGACTTGAGAAAGATGTAAACAAAGGCTACAATTTCAATAACTTTGACCACTGGACTTCCATCATACAACCCCAAGTTTAA 918 0.4227 MFIFMDKDANLEIQLPPGFRFHPSDEELIVHYLRNKVTSSPLPGSFIAEIDLYKYNPWELRSKALFGEDEWYFFTPRDRKYPNGVRPNRAAASGYWKATGTDKPIFTSCGMKNIGVKKALVFYMGRAPKGSKTDWIMHEYRLQNSMNSIPQQRGSMRLGEWVLVPGPTENGSTRSIWEDSNESIHEPTRHFREMNENSNPEPAKNCIGIASGSGFGCNNDVKAYASWHDDNSNIVIGAQFMAPVTEGLFNPLKKKNIEENDHLDLLNKKLSEEVDVGKQGLEKDVNKGYNFNNFDHWTSIIQPQV 305
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02017 305 Gene3D NAC domain 24 165 IPR036093 GO:0003677|GO:0006355
Phco2g02017 305 ProSiteProfiles NAC domain profile. 15 169 IPR003441 GO:0003677|GO:0006355
Phco2g02017 305 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 169 - -
Phco2g02017 305 SUPERFAMILY NAC domain 12 163 IPR036093 GO:0003677|GO:0006355
Phco2g02017 305 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco2g02017 Phco-Chr2 50851503 50852698 Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco2g02017 NAM 5.4e-38 No_clan