Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02013 ATGGCCGATGACTTCGAGTTCGCAGATAAAGTTCCTCCTTCGTTCGATCGAGTGGCCTCAAACCAAGGGTTCAACCCAGGCTTAATTGTCCTCCTGGTTGTTGGTGGGTTGCTGTTGACATTTCTCATTGGAAATTTTGTGCTCTACACGTATGCACAGAAGACCCTCCCTCCTAGGAAAAAGAAGCCTGTTTCAAAGAAAAAGATGAAAAAGGAGAGACTGAAGCAAGGTGTTTCTGCACCTGGAGAGTAG 252 0.4643 MADDFEFADKVPPSFDRVASNQGFNPGLIVLLVVGGLLLTFLIGNFVLYTYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02013 83 MobiDBLite consensus disorder prediction 59 83 - -
Phco2g02013 83 MobiDBLite consensus disorder prediction 59 73 - -
Phco2g02013 83 Pfam DNA binding protein S1FA 20 83 IPR006779 GO:0003677|GO:0005634|GO:0006355
Phco2g02013 83 PANTHER DNA-BINDING PROTEIN S1FA2 1 83 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02013 Phco-Chr2 50809342 50811251 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Phco2g02013 S1FA 3.8e-40 No_clan