Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco2g01976 | ATGGGGAAGGGAGGCCAAGGTTATGGGAATCGAGAAAAGGGTTCTGAAGATTCGGACCGTGATATCTTCAAGGCTTGGGCCAAGGATGTGCGTGAGTGCGAGGAACACTTCAAGGTGAATGTCAAAGTGGGTTTGAATCAAGAAGAGGTCGAGAATCGGCAAAAGATTTATGGATTGAACGAGTTGGAGAAACACGACGGCCAATCGATATGGAGTCTGATTCTCGACCAGTTCAATGACACTCTGGTTCGGATTCTACTTGTCGCCGCCATAATTTCTTTCGTGCTCGCTTGGTACGACGGCGACGAAGGCGGTGAGATGGAGATAACGGCGTTCGTTGAGCCTCTGGTGATATTCCTCATACTAATCGTGAACGCGATTGTTGGCGTGTGGCAGGAGAGCAATGCGGAGAAGGCGCTTGATGCGCTGAAAGAGATTCAGTCGGAGCACGCAGTGGTGATTCGGGAGGGCGCGAAAATCCCCAGTTTGCCGGCGAAGGATCTCGTCCCTGGCGACGTCGTGGAGCTTAAGGTTGGTGATAAGGTCCCTGCTGATATGCGCGTTGTGGAATTGATCAGTTCCACTTTGCGGTTGGAGCAGGGTTCTTTGACTGGAGAAAGTGAAGCGGTTAATAAGAGTAACAAGCGTGTGGAGGAGGATGCCGATATCCAGGGGAAGAGATGTATGGTTTTCGCGGGGACCACTGTTGTTAACGGGAATTGCATTTGCTTGGTCACTCAGACGGGCATGGATACGGAAATTGGGAAGGTGCATAAGCAGATACATGTTGCGTCGCAGAGTGAGGAAGATACCCCATTGAAGAAGAAGCTCAACGAGTTTGGAGAGAAACTAACCATGATCATTGGACTTATATGTATTTTGGTTTGGCTCATCAATGTTAAGTACTTCCTTTCATGGGAGTACGTGGATGGATGGCCCAGGAATTTCAAGTTTTCGTTTGAAAAGTGTACCTATTACTTTGAGATTGCTGTGGCGCTGGCTGTGGCTGCTATTCCAGAAGGTTTGCCGGCTGTCATCACCACTTGCCTGGCTCTTGGTACTCGCAAGATGGCCCAGAAGAATGCCCTGGTTCGGAAGCTACCTAGCGTGGAGACTCTGGGTTGTACCACTGTGATTTGTTCCGATAAAACTGGTACACTGACTACCAACCAAATGGCTGTGTCGAAATTAGTCGCAATTGGCCATAATGTGGATACACTAAGAGCCTTCAAGGTGGAAGGAACTACGTACAATCCAGCTGATGGTCAAATAGAGAACTGGCCGACTGCTGGATTGGATGCTAATCTTCAGATGATTGCGAAAATAGCTGCTATCTGTAATGATGCTGGAGTCGCACAATCAGAGCATAAGTTTGTCGCCCATGGAATGCCTACTGAAGCAGCTTTAAAGGTTTTGGTAGAGAAGATGGGCCATCCTGATGGATCCATGGATGTTCGGTCTGCAAGCACAAGTACCTTGCTGCGTTGTTGTGAATGGTGGAATGAGCATGACCGACGGCTTGCTACTCTCGAGTTTGACCGTGACAGGAAGTCAATGGGCGTTATTGTGGACTCTGGTCTAGGAAAAAGGTCGCTTCTAGTTAAGGGTGCTGTGGAAAACGTGTTAGACAGAAGCTCTAAAATTCAGTTGCGAGATGGTTCAGTAGTGGACCTGGATGATAATGCTAGGAACCTTGTATTGCAAGCACTTCATGAAATGTCAACTAGCGCATTGCGCTGTTTGGGATTTGCATACAAGGACGAGCTCCCCAAATTTGAAAACTACAGTGGTAGTGACGATCATCCAGCACACCAGCTTTTACTTAATCCTTCCAATTATCCATCAATTGAAAGTGAACTTATTTTTGTTGGCTTGGTTGGATTGAGGGACCCCCCTAGGGAGGAAGTATACCAAGCAATTGAAGACTGCAGAGAGGCTGGAATCCGTGTTATGGTTATAACTGGGGACAACAAGAACACTGCTGAAGCTATATGCCGTGAAATAGGTGTATTTTCCCCTGATGAAGACATTACTTCTAAAAGTTTAACAGGTAAAGATTTTATGGAATTGCGTGATAAAAAGGCCTATTTGGGTCAGAGTGGTGGCCTTTTGTTTTCAAGGGCTGAACCTAGGCACAAGCAAGAAATCGTGAGGCTGCTCAAAGAGGAAGGAGAGGTGGTGGCCATGACCGGGGATGGTGTTAATGATGCACCTGCCTTGAAGCTTGCAGACATTGGTGTTGCAATGGGCATTGCAGGGACTGAGGTGGCAAAGGAAGCTTCAGATATGGTGTTGGCAGATGATAATTTTAGTTCAATTGTTGCTGCTGTTGGTGAGGGTAGATCTATCTACAATAACATGAAGGCTTTCATAAGGTATATGATCTCTTCAAATATTGGCGAGGTTGCTTCAATATTTTTAACAGCTGCACTAGGTATTCCTGAAGGATTGATACCTGTCCAGCTTCTGTGGGTCAATCTTGTCACTGACGGACCCCCTGCAACTGCTCTAGGATTTAATCCTCCAGATAAGGATATAATGAAGAAGCCTCCTCGTCGCAGTGATGACTCATTAATTAATTTTTGGATTTTATTCCGCTATATGGTTATTGGGATTTATGTTGGATTAGCTACAGTTGGTATCTTCATCATATGGTATACACACGGTTCTTTCTTGGGTATTGACCTTAGTGGGGATGGACATTCTCTTGTCACTTATACTCAACTTGCCAACTGGGATCAATGCTCCTCATGGAAGAACTTCACTGCTTCTCCATTCACTGCTGGTGCTAAAACTATCACGTTCGACAACCCCTGTGATTACTTTCATACTGGTAAAGTGAAGGCTATGACATTGTCCCTTTCTGTGTTGGTAGCCATTGAAATGTTCAACTCTCTCAATGCCCTATCTGAAGATGGAAGCCTTTTGACAATGCCCCCTTGGGTCAACCCTTGGCTTCTTTTGGCAATGTCAGTATCATTTGGTCTGCACTTTTTGATCTTGTACGTGCCATTCTTGGCACAAGTATTTGGTATCGTGCCCCTGAGCTTAAACGAGTGGCTTTTGGTTTTGGCCGTTGCACTTCCGGTCATTCTGATTGACGAGATTCTGAAATTTGTGGGGAGATGTACAAGTGGGCCTCGACCATCAGCTGCAAGAAAATCAAAGCGAAAATCAGAGTAG | 3183 | 0.4612 | MGKGGQGYGNREKGSEDSDRDIFKAWAKDVRECEEHFKVNVKVGLNQEEVENRQKIYGLNELEKHDGQSIWSLILDQFNDTLVRILLVAAIISFVLAWYDGDEGGEMEITAFVEPLVIFLILIVNAIVGVWQESNAEKALDALKEIQSEHAVVIREGAKIPSLPAKDLVPGDVVELKVGDKVPADMRVVELISSTLRLEQGSLTGESEAVNKSNKRVEEDADIQGKRCMVFAGTTVVNGNCICLVTQTGMDTEIGKVHKQIHVASQSEEDTPLKKKLNEFGEKLTMIIGLICILVWLINVKYFLSWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVSKLVAIGHNVDTLRAFKVEGTTYNPADGQIENWPTAGLDANLQMIAKIAAICNDAGVAQSEHKFVAHGMPTEAALKVLVEKMGHPDGSMDVRSASTSTLLRCCEWWNEHDRRLATLEFDRDRKSMGVIVDSGLGKRSLLVKGAVENVLDRSSKIQLRDGSVVDLDDNARNLVLQALHEMSTSALRCLGFAYKDELPKFENYSGSDDHPAHQLLLNPSNYPSIESELIFVGLVGLRDPPREEVYQAIEDCREAGIRVMVITGDNKNTAEAICREIGVFSPDEDITSKSLTGKDFMELRDKKAYLGQSGGLLFSRAEPRHKQEIVRLLKEEGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSSIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLINFWILFRYMVIGIYVGLATVGIFIIWYTHGSFLGIDLSGDGHSLVTYTQLANWDQCSSWKNFTASPFTAGAKTITFDNPCDYFHTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSLNEWLLVLAVALPVILIDEILKFVGRCTSGPRPSAARKSKRKSE | 1060 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco2g01976 | 1060 | FunFam | ECA1 (ER-TYPE CA2+-ATPASE 1) | 794 | 1047 | - | - | |
| Phco2g01976 | 1060 | PRINTS | P-type cation-transporting ATPase superfamily signature | 624 | 635 | - | - | |
| Phco2g01976 | 1060 | PRINTS | P-type cation-transporting ATPase superfamily signature | 730 | 749 | - | - | |
| Phco2g01976 | 1060 | PRINTS | P-type cation-transporting ATPase superfamily signature | 380 | 394 | - | - | |
| Phco2g01976 | 1060 | PRINTS | P-type cation-transporting ATPase superfamily signature | 646 | 656 | - | - | |
| Phco2g01976 | 1060 | PRINTS | P-type cation-transporting ATPase superfamily signature | 754 | 766 | - | - | |
| Phco2g01976 | 1060 | PRINTS | P-type cation-transporting ATPase superfamily signature | 199 | 213 | - | - | |
| Phco2g01976 | 1060 | SFLD | C1.7: P-type atpase like | 361 | 782 | - | - | |
| Phco2g01976 | 1060 | Gene3D | - | 44 | 264 | - | - | |
| Phco2g01976 | 1060 | Gene3D | - | 76 | 1042 | - | - | |
| Phco2g01976 | 1060 | NCBIfam | HAD-IC family P-type ATPase | 117 | 307 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Phco2g01976 | 1060 | NCBIfam | HAD-IC family P-type ATPase | 319 | 401 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Phco2g01976 | 1060 | NCBIfam | HAD-IC family P-type ATPase | 704 | 811 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Phco2g01976 | 1060 | Pfam | Cation transporting ATPase, C-terminus | 815 | 1040 | IPR006068 | - | |
| Phco2g01976 | 1060 | Pfam | E1-E2 ATPase | 146 | 360 | - | - | |
| Phco2g01976 | 1060 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 24 | 1043 | IPR023298 | - | |
| Phco2g01976 | 1060 | SFLD | p-type atpase | 361 | 782 | IPR044492 | - | |
| Phco2g01976 | 1060 | FunFam | Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 | 237 | 408 | - | - | |
| Phco2g01976 | 1060 | Gene3D | - | 390 | 631 | IPR023299 | GO:0000166 | |
| Phco2g01976 | 1060 | Pfam | haloacid dehalogenase-like hydrolase | 377 | 744 | - | - | |
| Phco2g01976 | 1060 | Gene3D | - | 377 | 775 | IPR023214 | - | |
| Phco2g01976 | 1060 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 26 | 1047 | - | - | |
| Phco2g01976 | 1060 | FunFam | calcium-transporting ATPase, endoplasmic reticulum-type | 390 | 631 | - | - | |
| Phco2g01976 | 1060 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 387 | 628 | IPR023299 | GO:0000166 | |
| Phco2g01976 | 1060 | SMART | Cation_ATPase_N_a_2 | 24 | 98 | IPR004014 | - | |
| Phco2g01976 | 1060 | FunFam | Calcium-transporting ATPase, putative | 126 | 262 | - | - | |
| Phco2g01976 | 1060 | SUPERFAMILY | Calcium ATPase, transduction domain A | 149 | 260 | IPR008250 | - | |
| Phco2g01976 | 1060 | SUPERFAMILY | HAD-like | 378 | 834 | IPR036412 | - | |
| Phco2g01976 | 1060 | Pfam | Cation transporter/ATPase, N-terminus | 26 | 93 | IPR004014 | - | |
| Phco2g01976 | 1060 | FunFam | Calcium-transporting P-type ATPase, putative | 626 | 775 | - | - | |
| Phco2g01976 | 1060 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 382 | 388 | IPR018303 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco2g01976 | Phco-Chr2 | 50488829 | 50493983 | Dispersed/Transposed |