Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco2g01951 | ATGTTTAAGTATGTTGAACTTTGTGTGGACATGCGCAAAGGCCGGTTTGCAAAAGATGGACTTATTCAGTATAGGATAATATGCCAGCAAGTCAATGTTAGTTCACTGGAGGAGGTGATCAAACACTTTATGCATCTGTCAACTGAGAAAGCTGAACAAGCTCGGAGTCAAGCACAGGCATTAGAAGAAGCCCTTGATGTTGATGATTTAGAGGCTGATAAAAGGCCAGAGGACTTGATGTTGAGTTATGTCAGTGGTGAGAAAGGAAAGGACAGATCTGATCGAGAGCTTGTTACCCCATGGTTTAAATTTCTTTGGGAAACTTACCGGACAGTGCTCGAGATATTGCGAAACAACTCAAAACTGGAAGCTTTATATGCTATGACAGCTCATCGAGCTTTCCAGTTCTGTAAGCAATATAAACGAACAACTGAGTTCCGCAGACTTTGTGAGATCATAAGAAACCATTTGGCTAATCTCAATAAATACCGTGACCAAAGAGATAGGCCTGACCTTTCAGCTCCTGAAAGCTTACAGCTGTATCTTGATACTAGAGTTGAGCAGCTGAAAATTGCCACTGAACTTGAACTCTGGCAGGAAGCCTTCAGATCAGTGGAGGATATACATGGACTGATGTGCTTGGTCAAGAAAACTCCCAAGCCATCTTTGATGGTTGTTTACTATGTGAAGCTGACTGAAATATTTTGGATATCGTCAAGTCATCTTTATCATGCATATGCATGGTTCAGGCTCTTTTTATTGCAGAAAAGTTTCAATAAGAATCTAAGCCAAAAAGATTTGCAATTAATAGCTTCGTCTGTTGTTCTGGCCGCACTTTCAGTGCCTCCTCATGACCGCACACATGGTGCGTCTCATTTGGAACTGGAGCATGAAAAAGAAAGAAATTTGAGGATGGCCAATCTCATTGGCTTTAATCTTGAGACTAAACCTGAAAGTAGAGAAATGCTGTCAAGATCATCACTTCTTGCTGAACTGGCATCCAAGGGAGTGATGTCTTGTGTAACTCAGGAAGTGAAAGATGTTTACCATCTTTTGGAACATGAATTTCATCCCTCAGATCTTGCATTGAAAGCGCTGCCCTTGATAACTAAAATCTCAAAGTTAGGGGGCAAGCTTTCTACAGCTTCTTCTGTTCCAGAAGTACAATTGTCTCAATATGTACCAGCACTGGAAAGACTAGCTACCATGAGGTTGCTGCAGCAGGTGTCCAATGTGTACCAGACAATGAAGATTGAGACTTTAACTGGGATGATTCCATTCTTTGACTTTTCTGTAGTGGAAAAGATTGCTGTAGATGCTGTAAAGCAGAAGTTTGTGTCGATGAAGGTTGATCACATGAAAAATGTTGTGATTTTTTGCAAAACGAGTCTCGAGTCTGACGGTTTAAGGGATCACTTGGCCAATTTTGCTGAACAATTAAATAAGGCCCGACAAATGATTTATCCTCCTGATAGGAAACCATCTAAACTTGGAGCTTTACTTCCAACTTTGACAGAGGTTGTTGCCAAAGAACACAAGAGGCTTCTTGCTCGAAAATCAATTATTGAGAAGCGGAAAGAAGAACAAGAACGACAGCTTCTTGAAATGGAACGGGAGGAGGAGTCAAAAAGACTAAGACTTCAGAAAATAACTGAAGAAGCAGAACAAAGACGGCTTGCTACAGAGTATGAGCAGAGGAAGAATCAGAGGATCCTCAGAGAGATTGAAGAAAGAGAAATTGAAGAAGCTCAAGCTTTACTCCAGGAAGCTGAAAAACGTATTAAAAAGAAGGGGAAAAAGCCTATCATTGAGGGAGACAAAATCACCAAGCAGACCTTGATGGAGTTAACTTTGACTGAACAACTCCGGGAAAGACAGGAAATGGAAAAGAAGTTGCAGAAGTTAGCAAAAACAATGGATTATTTGGAAAGGGCAAAACGAGAGGAGGCTGCTCCCCTGATTGAAGCTGCATATCAACAACGTTTAGTGGAAGAGAGACTTCTTCATGAGCGTGAACAACAGCAAGAAGTTGAAGTTAGCAAACAGAGGCATGAGGGAGATCTCAAAGAGAAGGAGAGGCTTGCACGAATGATGGGCAATAAGGAGATATATGAGGTCCGAGTTGTTAGTCATCGCCAAGCAGAGTTTAATAGATTGAGAAGAGAACGGGAAGAGCGAATCTCTAGGATTTTGCAGTCGAGGAGACAGGAGAGGGAAAAACTGAGGAAGTTGAAGTATTATCTCAAATTAGAAGAAGAGAGACAACAAAAAATGCATGAGGAGGAGGAAGCTAGGAAACGTGAAGAGGCTGAAAGGAGAAAGAAGGAAGAGGCTGAACGCCTAGCAAAACTGGCCGAGATAGCTGAAAAACAGAGGCAGAGAGAGCGGGAACTCGAGGAAAAGGAGAGACAAAGGAGAGAAGCATTGTTAGGCAGAGCTGCTGAACCAGCTCCTCCTGCTCGACCATTGGAATCTGTAACAGCTCCTGCTGCAGCAGCTGCAGCCGCTACTGCTCCAACCCCTGGAAAATATGTGCCCAAGTTCATGCGAGATAGAGCTGAAAGAACAGGAACTGCTCCTCCTCCGGAAACAGACCGCTGGAGTAACAGTAGCAGCAGCAGGCAGGATGGTGACAGGTGGCGTGGTGATGATAAGAGAACTAGTTATGTAGCTGGTGGAGGTTCAAGGTCATCTTCTTCTTGGTCCAGGAATCCCCGTTGA | 2721 | 0.4304 | MFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRVEQLKIATELELWQEAFRSVEDIHGLMCLVKKTPKPSLMVVYYVKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDRTHGASHLELEHEKERNLRMANLIGFNLETKPESREMLSRSSLLAELASKGVMSCVTQEVKDVYHLLEHEFHPSDLALKALPLITKISKLGGKLSTASSVPEVQLSQYVPALERLATMRLLQQVSNVYQTMKIETLTGMIPFFDFSVVEKIAVDAVKQKFVSMKVDHMKNVVIFCKTSLESDGLRDHLANFAEQLNKARQMIYPPDRKPSKLGALLPTLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRILREIEEREIEEAQALLQEAEKRIKKKGKKPIIEGDKITKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERLLHEREQQQEVEVSKQRHEGDLKEKERLARMMGNKEIYEVRVVSHRQAEFNRLRREREERISRILQSRRQEREKLRKLKYYLKLEEERQQKMHEEEEARKREEAERRKKEEAERLAKLAEIAEKQRQRERELEEKERQRREALLGRAAEPAPPARPLESVTAPAAAAAAATAPTPGKYVPKFMRDRAERTGTAPPPETDRWSNSSSSRQDGDRWRGDDKRTSYVAGGGSRSSSSWSRNPR | 906 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco2g01951 | 906 | Hamap | Eukaryotic translation initiation factor 3 subunit A [EIF3A]. | 1 | 880 | IPR027512 | GO:0005852 | |
| Phco2g01951 | 906 | Coils | Coil | 44 | 71 | - | - | |
| Phco2g01951 | 906 | Pfam | PCI domain | 324 | 459 | IPR000717 | - | |
| Phco2g01951 | 906 | Coils | Coil | 512 | 553 | - | - | |
| Phco2g01951 | 906 | Gene3D | - | 303 | 461 | - | - | |
| Phco2g01951 | 906 | Gene3D | - | 220 | 293 | - | - | |
| Phco2g01951 | 906 | MobiDBLite | consensus disorder prediction | 891 | 906 | - | - | |
| Phco2g01951 | 906 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 303 | 445 | - | - | |
| Phco2g01951 | 906 | MobiDBLite | consensus disorder prediction | 753 | 810 | - | - | |
| Phco2g01951 | 906 | ProSiteProfiles | PCI domain profile. | 267 | 464 | IPR000717 | - | |
| Phco2g01951 | 906 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 219 | 293 | - | - | |
| Phco2g01951 | 906 | Coils | Coil | 618 | 648 | - | - | |
| Phco2g01951 | 906 | MobiDBLite | consensus disorder prediction | 753 | 906 | - | - | |
| Phco2g01951 | 906 | Gene3D | UVR domain | 168 | 219 | - | - | |
| Phco2g01951 | 906 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 392 | 483 | IPR000717 | - | |
| Phco2g01951 | 906 | Coils | Coil | 747 | 807 | - | - | |
| Phco2g01951 | 906 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT | 1 | 899 | IPR027512 | GO:0005852 | |
| Phco2g01951 | 906 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 168 | 219 | - | - | |
| Phco2g01951 | 906 | Coils | Coil | 566 | 600 | - | - |