Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01920 ATGGCGGATTTAGAAAATTTGCTCTTGGAGGCAGCGGGTAGAACCCGACACTCTCGTCCTACTTCAATAAGAGGACATGGTGATGGTGAGAGTGTCTTCAGTTCGGATGATGAACATGAGTATCCAGGCCCAAATCACCCTGCCTCACGGGTTCCCCTAAAGAAGAGATTTGATCTAAAGGAAAGAGATGATGGCAAGGGAAGTCAGGAAGAAGGGGATGACGATGTTGGTGGCCGATCTGATCACAAGGGTGATAGCAGCGATGAATATGATTTTGGTGATGATCTTTACAAGAATGAAGAAGACAGGCGTAAGCTTTCTGAGATGACTGAACTTCAGAGAGAGATGATATTATCTGATAGGGCTACCAAGAAGTATGATAAAGATTTATTGGGGAAGATATCGTCAAAGCGGGAGAAGGGAAAGACAACTATACCTGTGACACATATTTCACCTCCTCCACCATCTCGTCTGCGGTCATCAGTCAGATCAGTTGACAGGTCAGCTGCCAAGGATGGTGCTTTAAATGAATTGCGTGCGAAAAGATTAAAGCAGCAAGATTCAGAAGCAAACCGCGGACTAAGCGAGGCATCTAAAAGTTCAGGGCCTGGAAGTGTTTCACCAAAGCACAAACCTTTCTCTTTAACAAGTCTCACAAGCTCAAGTGATAGTGAAAGTGAAAATAGGTCCCTGAGTTATGATGCAGGGTTGAGTGATGATGAAATGATCATTGACAGTGATGATGACCGGATAATTTTAGGATCTGAAGGACTTTCATTTGAGGATATAAAAGAAATCACCGTTTGCAGATCGAAACTAACAAAATGGTTTATGGAGCCCTTTTTTGAGGAATTAATTGCTGGTTGCTTTGTAAGAGTTGGTATTGGTAGATCAAAGTCAGGACCTATCTACAGGCTCTGCATGGTAAAAAATGTTGATGCCACAGACTGTGATCGGGAGTATAAATTAGAAAATAAAATCACACACAAGTACTTAAATCTTGTCTGGGGAAATGAAACTTCTGCTGCAAGGTGGCAAATGACTATGGTTAGCGACTCTCTTCCCCTTGAGGAGGAGTTCATCCAGTGGATTAAGGAAGTAGAGCGAAGAGGTGGTCGGAGGCCAACAAAGCAAGAAGTGGAAGAAAAAAAACAAGCTATACAAAATATCAACTTGTTTGTTTACTCAGCTGCTACGGTGAAGCAGATGTTACAAGAGAAAAAATCTGCCAAAAGAAGACCACTAAATATTGCAGCTGAGAAGGATCGGTTAAGAACGCAATTAGAAATAGCACACAGTAAGCAAAATAATACTGAAGTGAATAAGATCATGACAAGGTTGCAAGAATTGGAGGAATCTCAGCACTCTAAGGAGAAGGATGTCAGAGCTTTGAAGCTTTCTGAGATGAATAAAAAGAACAGGTTTGAGAACTTCAAAAATGCTTCTGAATTGAAGCCAAGAAATACAGATTTGAAAGCAGGGGAGGCGGGTTATGATCCATTTTCAAGGAGATGGACTCGATCAAGAAATTACTATGCCGCAAAACCAGCTGAAGAGGCTGCAGCTGAAAATAATAGTGCCATTGATATGGTGGCTGATGAAGGCAGCTATCAGACGACAACGGCTGTGACAGGGGTGGCTGGCATGGCGGCTACTGCTGCAGCTTTGAAAGCTGCTGCCGGTGCTGGGAAGTTAGTAGATACATGTGCTCCGGTGGATCAAGGGACAGTGTCAAATGTGCTGCACGATTTTGAGCTGCCAATATCATTATCCATACTCCAAAACTTTGGTGGAGCCCAAGGAATTCAGGCTGGGTTTATGGCAAGAAAACAGAGAATAGAAGCAACTGTTGGATTTCAAGTCCCGGAGGAAAAAGGTAGGAGGGATGCGCGGACATTAACAGTTAGTGATTACAAGAGAAGAATAGGGCTTTTTTGA 1938 0.4293 MADLENLLLEAAGRTRHSRPTSIRGHGDGESVFSSDDEHEYPGPNHPASRVPLKKRFDLKERDDGKGSQEEGDDDVGGRSDHKGDSSDEYDFGDDLYKNEEDRRKLSEMTELQREMILSDRATKKYDKDLLGKISSKREKGKTTIPVTHISPPPPSRLRSSVRSVDRSAAKDGALNELRAKRLKQQDSEANRGLSEASKSSGPGSVSPKHKPFSLTSLTSSSDSESENRSLSYDAGLSDDEMIIDSDDDRIILGSEGLSFEDIKEITVCRSKLTKWFMEPFFEELIAGCFVRVGIGRSKSGPIYRLCMVKNVDATDCDREYKLENKITHKYLNLVWGNETSAARWQMTMVSDSLPLEEEFIQWIKEVERRGGRRPTKQEVEEKKQAIQNINLFVYSAATVKQMLQEKKSAKRRPLNIAAEKDRLRTQLEIAHSKQNNTEVNKIMTRLQELEESQHSKEKDVRALKLSEMNKKNRFENFKNASELKPRNTDLKAGEAGYDPFSRRWTRSRNYYAAKPAEEAAAENNSAIDMVADEGSYQTTTAVTGVAGMAATAAALKAAAGAGKLVDTCAPVDQGTVSNVLHDFELPISLSILQNFGGAQGIQAGFMARKQRIEATVGFQVPEEKGRRDARTLTVSDYKRRIGLF 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01920 645 Coils Coil 447 467 - -
Phco2g01920 645 MobiDBLite consensus disorder prediction 164 189 - -
Phco2g01920 645 Pfam Plus-3 domain 262 367 IPR004343 GO:0003677
Phco2g01920 645 PANTHER UNCHARACTERIZED 259 642 - -
Phco2g01920 645 SMART rtf1 257 369 IPR004343 GO:0003677
Phco2g01920 645 Gene3D - 258 389 IPR036128 GO:0003677
Phco2g01920 645 MobiDBLite consensus disorder prediction 51 144 - -
Phco2g01920 645 MobiDBLite consensus disorder prediction 30 44 - -
Phco2g01920 645 MobiDBLite consensus disorder prediction 190 232 - -
Phco2g01920 645 ProSiteProfiles Plus3 domain profile. 257 392 IPR004343 GO:0003677
Phco2g01920 645 FunFam RNA polymerase-associated protein RTF1 258 390 - -
Phco2g01920 645 MobiDBLite consensus disorder prediction 1 232 - -
Phco2g01920 645 SUPERFAMILY Plus3-like 259 389 IPR036128 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01920 Phco-Chr2 49807872 49809809 Dispersed