Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01917 ATGGCTGCTTACACTTGTTCTGCCACCGACCTCCACCCTCTTCTTGGCGGCGGCGCCAACGCCACCGCCGCCGCAGAATACATCTGCGGCCGTTTTGAGGCTATTTCAAACAAGCTTGTGGACACCACTTATGCTGTTGACAGCACTTTTCTTCTCTTCTCTGCTTATCTTGTATTCGCCATGCAGCTTGGCTTTGCCATGCTTTGTGCTGGTTCTGTACGTGCCAAGAACACCATGAACATCATGCTGACGAATGTCCTGGATGCTGCCACCGGTGGCATCTTCTTCTACGTGTTTGGCTTTGCCTTTGCTTTTGGCACCCCTTCCAATGGTTTCATTGGGAAACACTTATTTGGCCTTGATAAGTTTCCGTCGTCGAATTTTGACTACGGTTACTTTCTCTTTCAATGGGCTTTTGCCATTGCTGCTGCGGGGATTACAAGTGGTTCCATCGCGGAGAGAACACAGTTTGTGGCTTATTTGATTTACTCGTCGGTTCTGACTGGTTTGGTGTACCCTGTTGTGGCGCATTGGTTTTGGTGTTCTGATGGGTGGGGAAGTGCTGCTAGAGGGGAGGGTTTGTTGTTTGGATCTGGGGTTATTGATTTTGCTGGGTCTGGTGTCGTTCATTTGGTTGGTGCTGTTGCTGGCTTATGGGGTGCTTTGATTGAAGGCCCTAGAATTGGAAGGTTTGATCATAATGGGAAGGCTGTGCCAATGAAAGGACACAGTGGAACGTTGGTTGTTTTGGGGACGTTTTTGTTGTGGTTTGGTTGGTATGGTTTCAACCCTGGTTCGTTTCTGAATATTTTGAAGGCTTATGGAGAGAGTGGTTCTTATTATGGGCAATGGAGTGCTGTTGGGAGGACTGCAGTGACCACAACTCTTGCTGGATGTTCAGCAGCACTGACAACACTCTTTGCGAAACGTCTTCAAACGGGGCATTGGAATGTCACTGATGTGTGCAATGGTTTGCTTGGAGGGTTTGCTGCTATTACTGGAGGGTGTGCAGTGGTGGATCCTTGGGCTGCGATCATATGTGGGTTTGTGGCTGCTTGGGTGCTCATTGGTTTCAACTTGCTTGCTGAGAAGTTGAAGTATGATGATCCTCTTGAGGCTGCGCAACTTCATGGTGGGTGTGGCACATGGGGGGTTATCTTCACTGCTTTGTTTGCTAAGAAGGAGTATGTAAATGAGGTTTATCCAGGGCTAGCAAATAGGCCTTATGGGTTGTTCATGGGAGGGGGTGGAAGGTTGTTGGCTGCACATGTTGTTCAGATTTTGTCCATCATTGGTTGGGTGAGTGTGACAATGGGAGCAGTGTTCTTTGTGCTGTTTAAACTGGAATTGCTGAGGACATCACATGATGAGGAGATGGCGGGGTTGGATTTAACCAGCCATGGAGGAATGGCATATGAGTATCACGAAAAGGATGAAAGGAAACCGGTATTTGAAGTAACTGTTTGA 1467 0.4806 MAAYTCSATDLHPLLGGGANATAAAEYICGRFEAISNKLVDTTYAVDSTFLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFFYVFGFAFAFGTPSNGFIGKHLFGLDKFPSSNFDYGYFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGLVYPVVAHWFWCSDGWGSAARGEGLLFGSGVIDFAGSGVVHLVGAVAGLWGALIEGPRIGRFDHNGKAVPMKGHSGTLVVLGTFLLWFGWYGFNPGSFLNILKAYGESGSYYGQWSAVGRTAVTTTLAGCSAALTTLFAKRLQTGHWNVTDVCNGLLGGFAAITGGCAVVDPWAAIICGFVAAWVLIGFNLLAEKLKYDDPLEAAQLHGGCGTWGVIFTALFAKKEYVNEVYPGLANRPYGLFMGGGGRLLAAHVVQILSIIGWVSVTMGAVFFVLFKLELLRTSHDEEMAGLDLTSHGGMAYEYHEKDERKPVFEVTV 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01917 488 FunFam Ammonium transporter 28 486 - -
Phco2g01917 488 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Phco2g01917 488 SUPERFAMILY Ammonium transporter 44 452 - -
Phco2g01917 488 PANTHER AMMONIUM TRANSPORTER 26 468 - -
Phco2g01917 488 Gene3D Ammonium transporter AmtB like domains 28 487 IPR029020 -
Phco2g01917 488 NCBIfam ammonium transporter 47 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Phco2g01917 488 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01917 Phco-Chr2 49781715 49783181 Dispersed