Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01916 ATGTCTTATAGGCACACCATCCACGTGGATTTATCATTTCTGCTCCATGTAATTCATCAATTTTCTTCTCCTACCAGTGTTGCTCTAGTCTCAAGATCTCGATCAAGATTTAAGGTGCAGGTCAGTGTTACTCCAACTTTATCACAATCTTTCATCCATTGCAAAGAAATATTTTTGTGTATATCAAGAGGTGAAAAGGACGTGCAAGTTATGGAAGATGAACGCAAAGACGAAGAGAAACACGTAACAAAATCTGACTACTCGAGGACCCAATTAAAAGTACTTATTGTGGATGACGTTAGGGTTATTCGAATGACTCATAAAATGCTGTTGGACAGAGTTGGGGTAAAAGATCACGTTGCTGTGGAAAATGGCAAAGAAGCAGTTGAACTTCATAACAATGGTCAAAGTTTTGATTTGATTCTCATGGATAAGGACATGCCTGTCATGAATGGAATTGAGGCAACAAGGACGCTTCGTTCAATGGGTATTAGTTGCAAGATCATTGGTGTGTCGTCATCAACCTGCAATCAGCTATATGTACAAGAATTTGTTGAAGCAGGGCTAAATGACTTCTACACCAAACCCTTGACTGTTAAAATGCTTGGTGAAATTCTTGAGAAGATCAAGGAGAGTGACATCTGCAAAAACAAAGGCAAGACATATATAATGAAACCTAAGAACTCAAGTTCCCAATTGAAAGCACTTGTTGTAGATGATGATAGAGTAAACCGAATGACTCATCAAGCGCTGTTGAAAAAAGTTGGGGTGGAAAATCTTGCTTCAGTGGAAAATGGCAAAAAGGCCGTGGATCTTCACTGCAATGGTGAAAGTTTTGACCTAATTCTCATGGATAAAGACATGCCTGTCATGAATGGAATTGAGGCAACAAAGCAACTTCGTTCAATGGGCATTCGTGACATGATTGTTGGTGTGTCATCATCACGAGGTGCAGAGAATGTAGAACAATTCATGGAAGCAGGACTAGATGACTACTACACAAAGCCCTTGACGGTTGACACGCTCAAAGCAATTCTTGATAAGATGAAGTCATGA 1056 0.3968 MSYRHTIHVDLSFLLHVIHQFSSPTSVALVSRSRSRFKVQVSVTPTLSQSFIHCKEIFLCISRGEKDVQVMEDERKDEEKHVTKSDYSRTQLKVLIVDDVRVIRMTHKMLLDRVGVKDHVAVENGKEAVELHNNGQSFDLILMDKDMPVMNGIEATRTLRSMGISCKIIGVSSSTCNQLYVQEFVEAGLNDFYTKPLTVKMLGEILEKIKESDICKNKGKTYIMKPKNSSSQLKALVVDDDRVNRMTHQALLKKVGVENLASVENGKKAVDLHCNGESFDLILMDKDMPVMNGIEATKQLRSMGIRDMIVGVSSSRGAENVEQFMEAGLDDYYTKPLTVDTLKAILDKMKS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01916 351 CDD REC_hyHK_CKI1_RcsC-like 236 346 - -
Phco2g01916 351 CDD REC_hyHK_CKI1_RcsC-like 94 206 - -
Phco2g01916 351 ProSiteProfiles Response regulatory domain profile. 234 350 IPR001789 GO:0000160
Phco2g01916 351 SUPERFAMILY CheY-like 91 211 IPR011006 -
Phco2g01916 351 SMART REC_2 92 206 IPR001789 GO:0000160
Phco2g01916 351 SMART REC_2 233 346 IPR001789 GO:0000160
Phco2g01916 351 SUPERFAMILY CheY-like 232 349 IPR011006 -
Phco2g01916 351 PANTHER TWO-COMPONENT RESPONSE REGULATOR 230 350 - -
Phco2g01916 351 Gene3D - 220 351 - -
Phco2g01916 351 ProSiteProfiles Response regulatory domain profile. 93 210 IPR001789 GO:0000160
Phco2g01916 351 Gene3D - 69 219 - -
Phco2g01916 351 Pfam Response regulator receiver domain 94 204 IPR001789 GO:0000160
Phco2g01916 351 Pfam Response regulator receiver domain 236 346 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01916 Phco-Chr2 49774961 49778851 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco2g01916 Response_reg 8.2e-22 CL0304