Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01914 ATGGAGGAGGAGGGTAGTGTCAAAGCAGGAAGTAGTCTCCGAGCAGGCAGTACTATGAGTAGTTTGAGGATTGGGAGTGTATCAGTTTGGAGGAACAGTGGTGTGGAAATCTTTGCCAACTCTTTCCACCAGGAAGATGATGAAGAGGCTCTGAAATGGGCTGTTATTCAGAAACTTCCTACGATGGCACGTTTGAGGACAGGCTTGCTGACTTCAGCTGAAGGGGTTGCCAATGAGATTGATGTTCATCAACTGGGGTTGCAAGAAAGGAGAGGTTTGCTTGAGAGACTTGTCAGAGTTGTTGAAGAGGACAATGAGAAGTTCATGCTCAAGCTCAGGGACCGCATTGATAGAGTTGGAATTGCCATTCCTACAATAGAGGTCCGATTTGAGCACATGAGCGTTGGAGCAGAAGTTCATGTTGGTAGTAGAGCTCTGCCTACTTTCACTAACTACATGGTTAATAAAGTTGAGGGGCTATTGAACTTCCTACATCTACTCCCAAGTAGAAAACAGCATATAAATATTCTCCAGGATGTTAGTGGAATAATAAGGCCTGCCAGAATGACATTGCTTTTGGGCCTTCCAAGTTCTGGGAGGACCTCTCTCCTGTTGGCTTTGGCTGGAAGACTTGATTCAAAACTTAAGTTCAATGGAAAAGTGACTTATAATGGCCATGAGATGAATGAGTTTGTACCCCAACGAACTGCTGCTTATGTCAGTCAAAATGATCTTCATATTGGAGAAATGACAGTCAGAGAAACCATGGCCTTTTCAGCAAGAGTCCAAGGAGTTGGACCTAGTTATGATTTGCTAAGAGAGGTGTCCAGAAGAGAAAAAGAAGCAAATATTACACCTGATCATGATATAGATGTCTATATGAAGGCTGTCGCAACAGAAGGTCAGAAAGCAAATTTTATTACAGATTATATTCTAAGGATTCTAGGACTGGAGGTCTGTGCTGATACTGTTGTGGGAAATGAAATGTTAAGAGGGATATCTGGTGGACAAAGAAAACGTGTTACAACAGGGGAGATTCTGGTTGGACGACCTAAAGCTCTATTCATGGATGAAATATCTACTGGTTTGGATAGTTCCACAACTTTTCAAGTTGTGAATTCACTCAAGCACTATATCCATTCTCTCAAAGGAACAGCTGTTGTTTCACTCTTACAACCAGCACCAGAGACTTACAATCTTTTTGATGACATTATTCTACTCTCTGATGGGCAGATTGTGTATGAGGGTCCGCGTGAACATGTTCTTGAATTTTTCGCTTCTGTGGGTTTCAAGTGTCCTGAGAGGAAAGGTGTTGCAGACTTTTTGCAAGAAGTGACATCAAGGAAAGATCAGGAGCAATATTGGGTACTCAGAGATCAGCCTTACAGATTCGTCACAACCAAAGAGTTAGTAGAGGCATTTCAATCATTTCATGTTGGGCGAAGCCTTGATAATGAACTTGAGACTCAATTTGACAAGTCTAAAAGCCACCCTGCAGCTTTGGCAACCCAAATGTATGGATTAGGAAAATGGGAACTGTTTAAAGCTTGCTTCTCAAGAGAATTTTTACTCATGAAGCGTAATTCATTTCTTCACATCTTCCAACTTTGCCAGCTTGCTACAGTGGGCTTTATTGCAATGACTGTTCTTTTTCGGACTGAGATTCACCGAGATTCAGTGACTGATGGTGGTATATATGTGGGGGCATTGTTCTATGGCCTTCTTGTAATTTTTTTGGATGGATTTTCTGATCTTACCGTGACAATTTCTAAGCTTCCTGTTTTTTACAAGCAAAGAGACTTTCTCTTCTTCCCTTCATGGATATATGTTCTTCCTGGATGGATCCTGAAACTTCCCATGACTTTTGCGCTAGTGGGAATCTGGGTGTTCTTCACCTACTATGTTATTGGTTTTGATCCATATGTTGGAAGGCAATTCCTTCTTCTGTTATTTGTTAACCAGATGGCTTCATCCTTATTCCGGTTTATTGGAGCACTTGGTAGGGAACTGACAGTTGGTTTCACAATTGGGTCATTTACATTGTCCATCCTCATTGCTATGAGTGGTTTCGTCTTGTCAAAAGACAATGTGAAAAAATGGTGGCTGTGGGGCTTTTGGTCATCACCTATGATGTATGGACAAAATGCCCTAGTAAATAATGAGTTCCTAGGGAAGAGATGGAGACATGTTCTACCCAACTCAACTACACCATTAGGAGTTGAAGTTCTGAAATCTCGCGGGTTCTTCACTCAGTCAAAGTGGTATTGGATTGGTGTTGGGGCACTGATTGGATATACGATAGTGTTCAATATCGCTTACATCCTCGCTCTCACTTTCTTGAACCCATTAGTGCAGCATCAAGCTGTTAAATCAGACCAATCTCAAAGCAATGCACAGGATGGTGGAAGCATTTCTACTAGGCCTTCATCCAGAAGAAAAGAAGCTGAGAGAAGAGGAATGGTTCTTCCGTTTGAATCACATTCCATCACCTTTGAAGATGTAACATATTCTGTTGACATGCCACAGGAAATGAAGAATCAGGGTGTTGTTGAGGATAGGTTGGACCTTTTGAAGGGTGTCAGTGGTACTTTCAGACCAGGAGTTCTCACTGCTTTAATGGGTTCCACTGGTGCTGGCAAAACAACTCTGATGGATGTACTAGCTGGAAGAAAGACCGGGGGATATATTGGTGGGAATATCACAATTTCTGGCTATCCAAAGAAGCAAGAAACCTTTGCAAGAATTTCTGGATACTGTGAACAAAATGATATCCACTCTCCCCATGTCACAGTATATGAATCTTTACTCTACTCAGCATGGCTTCGATTATCAGCAGAAATCAATTCTGAAACCAGGAAGATGTTCATTGAGGAAGTGATTGAACTTGTGGAGCTGAACCCTCTAAAGCATGCAATTGTTGGATTGCCAGGTGTTAACGGTCTATCAACAGAGCAACGCAAAAGATTGACTATTGCTGTTGAGCTAGTGGCTAATCCCTCTATCATATTCATGGATGAGCCAACTTCTGGGCTAGATGCAAGAGCTGCTGCTATTGTCATAAGAGCAGTCAGAAACATAGTGGACACTGGAAGAACAGTTGTCTGCACAATCCATCAGCCTAGCATTGATATATTTGAATCTTTTGATGAGCTTTTTCTTATGAAGCGAGGAGGGCAAGAGATATATGTGGGGCCACTTGGACATCATTCTTCTAATTTAATCAGTTACTTTGAGGAAATTAAAGGGGTCAATACGGTTGAAGATGGCTACAATCCAGCAACGTGGATGTTGGAAGTCACAACTTCAGCAAAAGAAATGGAACTGGGGATTGATTTTGCTGAAGTGTACAAAAATTCAGAGTTATACAGCAAAAAGCCACAAGATCTTTTCAATGCCATGGGATCCATGTATGCTGCTGTTCTCCTTCTTGGTATTAAGAATGCTTATTCAGCACAACCGTTGGTGGCTGTTGAAAGAACAGTGTTTTATAGGGAAAAAGCTGCTGGAATGTATTCAGCTTTGGCATATGCTTTTGCTCAGGTTGTAATCGAACTACCTCATGTTCTTTTACAAAGTGTGGTTTATAGCAGTATAGTGTACGCAATGATCGGTTTTGAGTGGACTATAGCTAAATTTTTCTGGTACCTTTTCTTCATGTACCTCACCTTCCTCTACTTTACCTATTATGGCATGATGTCTGCTGCCATGACCCCAAACCCCATCATTGCGGTTATATTTTCTTCTGGAATCTATGAAGTATGGAATCTCTTTGCAGGATTCATTATCCCACGGCCAAGGATTCCTGTCTGGTGGAGATGGTACTATTGGGGAAATCCAGTGGCTTGGACTTTGTATGGGTTGGTGACATCACAATATGGAGATGTTCAAGGCCTTATTGAGTTTAATGGTAAAAGTACAACAGTGGAAGACTTTTTGAGAAACTACTTTGGTTTTAAGCATGATTTTTTGGGAGTGGTTTCAGCTGTACTTATAGTATATGGAGTAACTTTTGCATGCATCTATGCCATTGCCCTAAAATTGTTTAATTTCCAAAGACGTTAA 4062 0.4136 MEEEGSVKAGSSLRAGSTMSSLRIGSVSVWRNSGVEIFANSFHQEDDEEALKWAVIQKLPTMARLRTGLLTSAEGVANEIDVHQLGLQERRGLLERLVRVVEEDNEKFMLKLRDRIDRVGIAIPTIEVRFEHMSVGAEVHVGSRALPTFTNYMVNKVEGLLNFLHLLPSRKQHINILQDVSGIIRPARMTLLLGLPSSGRTSLLLALAGRLDSKLKFNGKVTYNGHEMNEFVPQRTAAYVSQNDLHIGEMTVRETMAFSARVQGVGPSYDLLREVSRREKEANITPDHDIDVYMKAVATEGQKANFITDYILRILGLEVCADTVVGNEMLRGISGGQRKRVTTGEILVGRPKALFMDEISTGLDSSTTFQVVNSLKHYIHSLKGTAVVSLLQPAPETYNLFDDIILLSDGQIVYEGPREHVLEFFASVGFKCPERKGVADFLQEVTSRKDQEQYWVLRDQPYRFVTTKELVEAFQSFHVGRSLDNELETQFDKSKSHPAALATQMYGLGKWELFKACFSREFLLMKRNSFLHIFQLCQLATVGFIAMTVLFRTEIHRDSVTDGGIYVGALFYGLLVIFLDGFSDLTVTISKLPVFYKQRDFLFFPSWIYVLPGWILKLPMTFALVGIWVFFTYYVIGFDPYVGRQFLLLLFVNQMASSLFRFIGALGRELTVGFTIGSFTLSILIAMSGFVLSKDNVKKWWLWGFWSSPMMYGQNALVNNEFLGKRWRHVLPNSTTPLGVEVLKSRGFFTQSKWYWIGVGALIGYTIVFNIAYILALTFLNPLVQHQAVKSDQSQSNAQDGGSISTRPSSRRKEAERRGMVLPFESHSITFEDVTYSVDMPQEMKNQGVVEDRLDLLKGVSGTFRPGVLTALMGSTGAGKTTLMDVLAGRKTGGYIGGNITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSAEINSETRKMFIEEVIELVELNPLKHAIVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVIRAVRNIVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGHHSSNLISYFEEIKGVNTVEDGYNPATWMLEVTTSAKEMELGIDFAEVYKNSELYSKKPQDLFNAMGSMYAAVLLLGIKNAYSAQPLVAVERTVFYREKAAGMYSALAYAFAQVVIELPHVLLQSVVYSSIVYAMIGFEWTIAKFFWYLFFMYLTFLYFTYYGMMSAAMTPNPIIAVIFSSGIYEVWNLFAGFIIPRPRIPVWWRWYYWGNPVAWTLYGLVTSQYGDVQGLIEFNGKSTTVEDFLRNYFGFKHDFLGVVSAVLIVYGVTFACIYAIALKLFNFQRR 1353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01914 1353 SMART AAA_5 866 1058 IPR003593 GO:0016887
Phco2g01914 1353 SMART AAA_5 186 418 IPR003593 GO:0016887
Phco2g01914 1353 MobiDBLite consensus disorder prediction 791 806 - -
Phco2g01914 1353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 845 1067 IPR027417 -
Phco2g01914 1353 Gene3D - 828 1074 IPR027417 -
Phco2g01914 1353 FunFam ABC transporter G family member 34 164 468 - -
Phco2g01914 1353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 433 IPR027417 -
Phco2g01914 1353 Pfam ABC-2 type transporter 392 445 IPR043926 GO:0140359
Phco2g01914 1353 Pfam ABC transporter 177 359 IPR003439 GO:0005524
Phco2g01914 1353 CDD ABCG_PDR_domain2 827 1064 IPR034003 -
Phco2g01914 1353 Pfam ABC-transporter N-terminal 102 151 IPR029481 -
Phco2g01914 1353 MobiDBLite consensus disorder prediction 791 818 - -
Phco2g01914 1353 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 829 1082 IPR003439 GO:0005524
Phco2g01914 1353 Gene3D - 165 469 IPR027417 -
Phco2g01914 1353 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 1124 1353 - -
Phco2g01914 1353 FunFam ABC transporter G family member 40 843 1073 - -
Phco2g01914 1353 Pfam ABC transporter 857 1009 IPR003439 GO:0005524
Phco2g01914 1353 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 161 434 IPR003439 GO:0005524
Phco2g01914 1353 Pfam Plant PDR ABC transporter associated 727 789 IPR013581 -
Phco2g01914 1353 Pfam ABC-2 type transporter 1120 1291 IPR013525 GO:0016020|GO:0140359
Phco2g01914 1353 Pfam ABC-2 type transporter 513 722 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01914 Phco-Chr2 49749317 49757171 Dispersed/Tandem