Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01910 ATGGTTAATATTGTGGAGGGTCTGTTGAACTCTCTTCATATTCTACAAAGTAGAAAACAACATATACATATTCTCGAAGATGTCAGTGGAATAATAAAGCCTGGCAGAATGACATTACTTTTGGGCCCTCCAAGTTCCGGAAAAACCACACTATTGTTGGCCTTGGCAGCAAGACTTGATCCAAAGTTAAAGTTTTCTGGAAAGGTGACTTATAATGGTCATGCGATGGATGAGTTTGTACCCCAAAGAACTGCAGCATATGTCAACCAAAATGATCTTCATATTGCAGAGTTGACGGTCAGAGAAACCTTGGCCTCTCAGCAAGAGTCCAAGGTGTTGGAACTCGTTATGGTTAATTTGCTAGCAGAATTGTCGAGAAGAGAAAAAGAGGCAAATATCATGCCTGATCCAGATATTGATGTCTACATGAAGGCTGTAGCAACTGAAGGCCAGAAAGCAAATTTGATAACAGATTACGTCCTAAGGATTTTAGGACTGGAGACATGTGCTGATACCGTTGTAGGAAATACAATGTTAAGGGGGATCTCTGGTGGACAAAAGAAACGCCTTACAACAGGAGAGATGCTGGTTGGACCAGATAAAGCTTTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACCTTCCAAATTGTGAATTCACTCAAGCATTGTGTTCACATTCTCAAAGGAACCACAGTCATCTCACTCCTGCAGCCAGCACCAGAGACTTATAATCTTTTTGATGACATTATTCTACTCTCTGATAGTTATATAGTGTACCAGGGTCCCCGCGAATATGTGCTTGAATTTTTCGAATCAATGGGTTTTCAATGTCCCGAGAGAAAAGGTGTGGCAGACTTTTTGCAAGAAGTAACATCAAGGAAAGACCAGGAACAGTACTGGGCACACAAAGATCAACCTTATAGATTTGTCAGAGCTAAAGAATTCTCAGAGGCACTCAAGTCATTTCATGTTGGGAGAAGCCTTCGTGTAGAACTTGATAGTGAATTTGACAAGTCTAAGAGTCACCCAGCTGCTTTGACAACCAAAATATTTGGAGTGGGCAAATGGGAACTGTTAAAAGCTTGCTTATCAAGAGAATATTTACTTATGAAGCGTAATTCATTTGTTTACACCTTCAGGATGAGCCAGCTTGCTATAATGGCATTTATTACCATGACAATCTTCCTCCGGACTGAGATGCGTAGAGACTCTGTGACTGATGGCGGGATATATGTCGGTGCATTGTTCTATGGCCTTTCTGTGATGATGTTCAATGAATTTCCTCAACTTACCATGGTCGTTTCAAAGCTTCCTGTTTTCTACAAGCAAAGGGATAATCTGTTTTTTCCTTCATGGGCATATGCTCTTCCTGCATGGATCTTAAAAATCCCTATGACTTTTGTAGAAGTTGCTGTTTGGGTATTCCTAACCTACTATGTCATTGGATTTGATCCAAATTTTGGAAGATTTTTTAGACAATACCTTGTTCTTTTACTAGTGAACCAGATGGCTTCCGCATTATTCCGATTTCTTGCAGGAGTTGGGAGGGAATTGAAAGCAGCTTTAACACTTGGGTCATTTATACTGACCATCCTTTTTGCTATGAGTGGTTTTATTCTATCAAAAGACAACATAAAAAAATGGTGGTTATGGGGCTTCTGGATATCACCTATGATGTATGGACAAAATGCTATGGTAAATAACGAGTTCCTTGCGAAGAGATGGAGACATGTTCTACCTCACTCTATGGAGCCTCTTGGAGTCGAAGTTTTGAAATCACGGGGATTCTTCATCCAATCATATTGGTTTTGGATAGGCGTTCTGGTTTTGATTGGATATACATTACTTTTCAACTTTGGCTACATCCTTGCTCTTACGTATTTGAGCAGACCTGGAAAGCAACATACATTTATATCCGAAGAACCGGGAAACAATGAGCAAAATGGTGGTAGTAATAAAGGAACTAATGTGATGAGATACATAAAATACAACTTCACTGATCACTCAATTAAAGAGAGAAATGGCGAAAGTATATGTGGAAATACATCTTCTCATAATTTTCCCTCTAGCTATAGGGGAATGGTTCTTCCTTTTGAACCACATTCTATCACCTTTGATGAAGTAACATATGCTGTGGACATGCCACAGGAAATGAGGAACCAAGGAATTGTTGAGAATAAATTGGTTCTTTTGAAAGGTGTCAGTGGATCCTTCAGGCCAGGTGTTCTCACTGCTTTAATGGGTGTCACCGGAGCAGGCAAAACAACTCTGATGGATGTACTTGCTGGTAGAAAAACTGGAGGATATGTTGGAGGGAACATTACAATCTCTGGGTATCAGAAGAAGCAAGAAACATTTGCAAGAATTTCAGGATACTGTGAGCAAAACGACATCCACTCTCCTCGTGTTACTGTGTATGAATCCTTGCTTTATTCAGCGTGGCTCAGATTGTCCCCAGACATCAATGCTCAAACAAGAAAGATGTTCATTGAGGAAGTCATGGAACTTGTGGAATTGAAACCACTAAGGCATGCATTAGTGGGATTGCCAGGTGTTAATGGTCTCTCGATAGAGCAACGTAAAAGGTTGACAATTGCAGTTGAACTTGTAGCAAATCCTTCCATAATATTCATGGATGAGCCGACTTCCGGGCTAGATGCAAGAGCAGCAGCTATTGTCATGAGAACTGTTAGGAACACTGTAGACACTGGAAGAACAGTTGTTTGTACAATCCATCAGCCTAGCATAGACATATTTGAATCATTTGATGAGCTTTTTCTAATGAAGCAAGGGGGGCAAGAGATATATGTGGGGCCACTTGGACTTCGTTCTTCCAATTTAATTAGTTACTTTGAGGAAATCCAAGGTATCGGTAAGATTAAAGATGGCTATAATCCAGCAACATGGATGTTGGAAGTCACAAGTTCAGCAAAAGAAATGGAATTGGGGATTGATTTTGCCCAGGTGTACAAAAATTCAGAGTTACACAGGAGAACTAAAGCACTTGTTATAGAATTGAGTACTCCCTCTCCTGGTTCCAAAGACCTTTATTTTCCTTCACAGTACTCAACTTCCTTCTTCACCCAATGCATGGCTTGCTTATGGAAACTACATTGGTCTTACTGGCACAATCCTCAATACACTGCCATAAGATTTCTCTACTCAACTATTGTAGCTGTTTTGCTCGGGAGCATGTTTTGGAACCTTGGCTCAAAAATTGAAAAGCAACAAGATCTTTTCAATGCCATGGGCTCCATGTATGTTGCTGTTCTCCTTCTTGGAGTTAAGAATTCTAATTCAGTGCAGTCAGTAGTTGCTGTTGAGAGGACAGTCTTTTATAGGGAAAGAGCAGCTGGAATGTATTCAGCTTTTCCATATGCTTTTGCCCAGGTTCTGATTGAGCTCCCATATGTACTTGGACAAGCTGTAGTCTATAGCATTATAATTTATGCAATGATTGGTTATGAGTGGACTGTGGCTAAATTTTTCTGGTGCCTATTCTTCATGTACTTTACCTTCCTGTACTTCACCTACTATGGAATGATGGCAGTGGCAGTGACCCCTAACCAACACATCTCCGGTATAGTTTCTGCTGGATTTTATTCAGTGTGGAATATCTTCTCAGGATTCGTAGTCCCACGGCCAAGGATCCCAGTATGGTGGAGGTGGTACAGTTGGGCAAATCCAATGTCTTGGAGTTTGTATGGTTTGGTGGCTTCACAATATGGAGATATAAAGCAAAGCCTTGAATCCAGTGATGGGACAACAACAGTGGAAAGCTTTGTGGGAAGTTACTTTGGTTTCAAGCATGATTTTCTTGGAGTGGTTGCAGCTGTGATGGTTGCATTCACAGTACTTTTTGCATTGGTCTTTGCTATATCAGTGAAAATATTTAATTTCCAGCGGCGTTAG 3924 0.4049 MVNIVEGLLNSLHILQSRKQHIHILEDVSGIIKPGRMTLLLGPPSSGKTTLLLALAARLDPKLKFSGKVTYNGHAMDEFVPQRTAAYVNQNDLHIAELTVRETLASQQESKVLELVMVNLLAELSRREKEANIMPDPDIDVYMKAVATEGQKANLITDYVLRILGLETCADTVVGNTMLRGISGGQKKRLTTGEMLVGPDKALFMDEISTGLDSSTTFQIVNSLKHCVHILKGTTVISLLQPAPETYNLFDDIILLSDSYIVYQGPREYVLEFFESMGFQCPERKGVADFLQEVTSRKDQEQYWAHKDQPYRFVRAKEFSEALKSFHVGRSLRVELDSEFDKSKSHPAALTTKIFGVGKWELLKACLSREYLLMKRNSFVYTFRMSQLAIMAFITMTIFLRTEMRRDSVTDGGIYVGALFYGLSVMMFNEFPQLTMVVSKLPVFYKQRDNLFFPSWAYALPAWILKIPMTFVEVAVWVFLTYYVIGFDPNFGRFFRQYLVLLLVNQMASALFRFLAGVGRELKAALTLGSFILTILFAMSGFILSKDNIKKWWLWGFWISPMMYGQNAMVNNEFLAKRWRHVLPHSMEPLGVEVLKSRGFFIQSYWFWIGVLVLIGYTLLFNFGYILALTYLSRPGKQHTFISEEPGNNEQNGGSNKGTNVMRYIKYNFTDHSIKERNGESICGNTSSHNFPSSYRGMVLPFEPHSITFDEVTYAVDMPQEMRNQGIVENKLVLLKGVSGSFRPGVLTALMGVTGAGKTTLMDVLAGRKTGGYVGGNITISGYQKKQETFARISGYCEQNDIHSPRVTVYESLLYSAWLRLSPDINAQTRKMFIEEVMELVELKPLRHALVGLPGVNGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKQGGQEIYVGPLGLRSSNLISYFEEIQGIGKIKDGYNPATWMLEVTSSAKEMELGIDFAQVYKNSELHRRTKALVIELSTPSPGSKDLYFPSQYSTSFFTQCMACLWKLHWSYWHNPQYTAIRFLYSTIVAVLLGSMFWNLGSKIEKQQDLFNAMGSMYVAVLLLGVKNSNSVQSVVAVERTVFYRERAAGMYSAFPYAFAQVLIELPYVLGQAVVYSIIIYAMIGYEWTVAKFFWCLFFMYFTFLYFTYYGMMAVAVTPNQHISGIVSAGFYSVWNIFSGFVVPRPRIPVWWRWYSWANPMSWSLYGLVASQYGDIKQSLESSDGTTTVESFVGSYFGFKHDFLGVVAAVMVAFTVLFALVFAISVKIFNFQRR 1307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01910 1307 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 283 IPR027417 -
Phco2g01910 1307 Pfam ABC-2 type transporter 362 574 IPR013525 GO:0016020|GO:0140359
Phco2g01910 1307 Pfam ABC-2 type transporter 1032 1246 IPR013525 GO:0016020|GO:0140359
Phco2g01910 1307 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 707 959 IPR003439 GO:0005524
Phco2g01910 1307 FunFam ABC transporter G family member 34 12 317 - -
Phco2g01910 1307 Pfam ABC-2 type transporter 241 342 IPR043926 GO:0140359
Phco2g01910 1307 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 723 942 IPR027417 -
Phco2g01910 1307 Gene3D - 707 946 IPR027417 -
Phco2g01910 1307 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 1 1307 - -
Phco2g01910 1307 Pfam ABC transporter 735 887 IPR003439 GO:0005524
Phco2g01910 1307 Gene3D - 11 323 IPR027417 -
Phco2g01910 1307 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 9 283 IPR003439 GO:0005524
Phco2g01910 1307 SMART AAA_5 34 267 IPR003593 GO:0016887
Phco2g01910 1307 SMART AAA_5 744 936 IPR003593 GO:0016887
Phco2g01910 1307 FunFam ABC transporter G family member 40 721 951 - -
Phco2g01910 1307 Pfam Plant PDR ABC transporter associated 579 642 IPR013581 -
Phco2g01910 1307 Pfam ABC transporter 25 208 IPR003439 GO:0005524
Phco2g01910 1307 CDD ABCG_PDR_domain2 704 942 IPR034003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01910 Phco-Chr2 49668739 49675819 Tandem