Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01901 ATGAAGAAGATCAAGAACCAAATGAAAATCCAGCTTTTCATCTTCTTTTGCTACATTGGTTGTTCCTCCTATGGTTTCTCTGCTGCTGTAAATGATGAAGTATCGACTTTGCTTTCTATAAAAGCAAGTCTCATTGATCCATTGAACACTCTTCGTGATTGGAAACTGCATGACAAAGCACCGGGAAAGGATGCATCTCATTGTAGCTGGACTGGCATCAAATGCAACTCAGCTGGAGCCGTTGAGGAGCTTGATCTCTCCCACAAGAATCTCAGTGGTACAGTATCCAATGTTATACAAAGACTTAAAAGTCTTACCTCTCTCAACTTGTGTTGCAATGCTTTTTCATCACCATTGCCAAAATCCTTAGCCAATCTCACAACACTTAACAAACTTGATGTGAGCCAAAATTTCTTCGTTGGTGACTTTCCATTAGGCCTTGGAAGAGCATGGAGACTCATGACCTTAAATGCATCCAGCAATGAATTCTCAGGTTCTCTTCCTGAGGACCTTGGAAATGCCTCCTCCTTAGAGATGCTTGATCTCAGAGGCAGCTTTTTTGTAGGGTCAGTCCCAAAATCATTCAGTAACTTGCATAAGTTGAGGTTCCTTGGTCTATCAGGGAACAATCTCACTGGTAAAATTCCTGGAGAGCTGGGACAACTTTCATCACTGGAGTATATGATCCTCGGATATAATGAATTTGAAGGTGTCATTCCAGAAGAGTTTGGCAACCTCACCAATCTCAAGTATCTTGATTTAGCAGTGGCCAATCTTGGTGGTGAGATTCCAGGTGTATTGGGAAAGCTCAAGTTGTTGAATACAGTTTTCTTATACAACAACAATTTTGAAGACAGAATTCCAGCAGCAATTGGCAATATGACTTCTTTGCAGTTGCTGGATCTTTCTGATAACATGTTGTCAGGACAAATTCCGGCTGAAATAAGTCAGCTGAAGAATTTAAAACTTCTCAACTTGATGGGAAACCAGCTGACTGGTCCTGTGCCTTCTGGCTTTGGAGATTTGTCACAACTGGAGGTACTTGAGCTATGGAACAATTCCTTGTCAGGGCCATTGCCTAGTAAACTTGGCAAGAATTCACCATTGCAATGGTTGGATGTGTCATCCAATTCTTTCTCTGGAGAGATTCCAGAAACTCTTTGCAGCCAGGGCAATCTCACCAAGCTTATACTATTCAACAATGCCTTCTCTGGTCCAATTCCATCAAGCCTATCAACGTGTTTTTCACTTGTACGAGTTCGAATTCACAACAATTTTCTTTCAGGGACAGTTCCTGTGGGTCTTGGCAAGCTTGGGAAGCTTCAAAGGTTAGAATTGGCTAACAATAGTCTTTCTGGTGGAATTCCTGATGACATTGCTTCTTCCACATCCCTTTCCTTCATTGATCTCTCAAGAAACAAACTCCATTCTTCTCTTCCCTCCACCGTCCTTTCCATTCCAAACCTGCAGGCTTTCATGGTCTCCAACAACAACTTGGAAGGTGAAATCCCAGACCAATTCCAGGACTGTCCATCCCTTGCAGTTCTTGATCTCTCATCAAATCATCTATCTGGAAGCATTCCAGCAAGCATTGCTTCATGTCAGAAGTTGGTAAATTTGAACCTCCAAAACAACCAATTGACTGGTGAAATCCCGAAATCATTAGCTAAGATGCCTTCATTGGCCATGGTTGACCTTTCCAACAATTCTCTGACAGGCCAAATACCTGAAAGCTTTGGAATTTCTCCAGCTCTTGAAGCACTGAATGTCTCATACAATAAGCTAGAAGGCCCAGTCCCAGCGAATGGAATACTAAGAACTGTAAATCCAAATGATCTTGTGGGAAATGTTGGCCTATGTGGTGGTGTCCTCCCTCCATGTGACAAAAACTCAGCATACTCCTCAAGGCAAAGAAGCTTACGCACAAAGCATATGATTACAGCATGGATCACTGGAATATCATCAATCCTAGTTATTGGGATAGCGATTGTGGTAGCTAGATCTTTGTACATAAGATGGTACACTGATGGGTTTTGCTTCCGAGAAAGATTTTACAAGGGTAGCAAAGGATGGCCCTGGAGATTGATGGCATTTCAGCGGCTTGGTTTTACAAGTACTGATATTCTAGCTTGCATCAAGGAAACAAATGTGATTGGCATGGGAGCCACAGGTATTGTTTATAAGGCTGAGGTACAGCAATCAAACACAGTTGTGGCAGTGAAAAAATTGTGGAGAACAGGAACTGATATTGAAGTAGGACGTAGTGATGACCTTGTGGGGGAGGTGAATCTTTTAGGGAGACTAAGGCATAGGAACATTGTTAGACTATTAGGATTTCTTCATAATGACATTGATGTGATGATAGTTTATGAATTCATGCACAATGGCAACCTAGGAGAAGCCTTGCATGGTAGACAAGCAACAAGATTGCTTGTAGACTGGGTTTCACGGTACAACATAGCTCTAGGAGTTGCACAAGGACTTGCTTATCTTCATCATGATTGTCATCCCCCCGTTATCCATCGAGATATCAAGTCAAACAATATATTGCTTGATGCAAATCTTGAGGCACGGATAGCAGATTTTGGTTTAGCCAAGATGATGATCAAGAAGAATGAAACAGTCTCCATGGTTGCTGGATCTTATGGTTATATTGCCCCTGAATATGGATATGCCTTGAAGGTAGATGAGAAGATTGATGTTTACAGTTATGGAGTAGTTTTGTTGGAACTTCTCACAGGAAAGAGGCCTTTAGATCCAGACTTTGGAGAGTCAATAGACATTGTAGAGTGGATTAGAATGAAGATTAGAGACAACAAATCACTGGAAGAAGCATTAGACCCCAGTGTAGGAAATAGCAGGCATGTTGTAGAAGAGATGCTTCTAGTTCTAAGAATAGCAATTATTTGCACAGCCAAGCTCCCCAAGGACAGACCAACCATGAGGGATGTCATTATGATGCTTGGAGAGGCTAAGCCTCGCAGAAAGAGCAGTGGCAATGATGCAGCTCACAACAAAGAGTCACCAGTTTTTATCACATCACCAGTTAATGGCCTAATGCAACCTTCAGCCAGTCAGTCCCCAGCAAACCAAGCCAATAACAAACACAAATCAAACATGACAAGCAAGTGCAAAGCGGTACAAAGAGATAGGACTTTTATTAACGGATCACAGAATAAATTACATGTATTATAG 3195 0.4182 MKKIKNQMKIQLFIFFCYIGCSSYGFSAAVNDEVSTLLSIKASLIDPLNTLRDWKLHDKAPGKDASHCSWTGIKCNSAGAVEELDLSHKNLSGTVSNVIQRLKSLTSLNLCCNAFSSPLPKSLANLTTLNKLDVSQNFFVGDFPLGLGRAWRLMTLNASSNEFSGSLPEDLGNASSLEMLDLRGSFFVGSVPKSFSNLHKLRFLGLSGNNLTGKIPGELGQLSSLEYMILGYNEFEGVIPEEFGNLTNLKYLDLAVANLGGEIPGVLGKLKLLNTVFLYNNNFEDRIPAAIGNMTSLQLLDLSDNMLSGQIPAEISQLKNLKLLNLMGNQLTGPVPSGFGDLSQLEVLELWNNSLSGPLPSKLGKNSPLQWLDVSSNSFSGEIPETLCSQGNLTKLILFNNAFSGPIPSSLSTCFSLVRVRIHNNFLSGTVPVGLGKLGKLQRLELANNSLSGGIPDDIASSTSLSFIDLSRNKLHSSLPSTVLSIPNLQAFMVSNNNLEGEIPDQFQDCPSLAVLDLSSNHLSGSIPASIASCQKLVNLNLQNNQLTGEIPKSLAKMPSLAMVDLSNNSLTGQIPESFGISPALEALNVSYNKLEGPVPANGILRTVNPNDLVGNVGLCGGVLPPCDKNSAYSSRQRSLRTKHMITAWITGISSILVIGIAIVVARSLYIRWYTDGFCFRERFYKGSKGWPWRLMAFQRLGFTSTDILACIKETNVIGMGATGIVYKAEVQQSNTVVAVKKLWRTGTDIEVGRSDDLVGEVNLLGRLRHRNIVRLLGFLHNDIDVMIVYEFMHNGNLGEALHGRQATRLLVDWVSRYNIALGVAQGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIKKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELLTGKRPLDPDFGESIDIVEWIRMKIRDNKSLEEALDPSVGNSRHVVEEMLLVLRIAIICTAKLPKDRPTMRDVIMMLGEAKPRRKSSGNDAAHNKESPVFITSPVNGLMQPSASQSPANQANNKHKSNMTSKCKAVQRDRTFINGSQNKLHVL 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01901 1064 Gene3D Phosphorylase Kinase; domain 1 712 796 - -
Phco2g01901 1064 Gene3D Ribonuclease Inhibitor 28 183 IPR032675 -
Phco2g01901 1064 Pfam Protein kinase domain 714 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01901 1064 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 186 286 - -
Phco2g01901 1064 Gene3D Ribonuclease Inhibitor 391 631 IPR032675 -
Phco2g01901 1064 FunFam Leucine-rich repeat receptor protein kinase EMS1 287 370 - -
Phco2g01901 1064 FunFam MDIS1-interacting receptor like kinase 1 712 796 - -
Phco2g01901 1064 MobiDBLite consensus disorder prediction 1018 1044 - -
Phco2g01901 1064 Pfam Leucine rich repeat 487 547 IPR001611 GO:0005515
Phco2g01901 1064 Pfam Leucine rich repeat 273 331 IPR001611 GO:0005515
Phco2g01901 1064 SUPERFAMILY RNI-like 83 389 - -
Phco2g01901 1064 Gene3D Transferase(Phosphotransferase) domain 1 797 1013 - -
Phco2g01901 1064 Gene3D Ribonuclease Inhibitor 184 290 IPR032675 -
Phco2g01901 1064 SUPERFAMILY Protein kinase-like (PK-like) 708 988 IPR011009 -
Phco2g01901 1064 SMART serkin_6 712 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01901 1064 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 371 631 - -
Phco2g01901 1064 Pfam Leucine rich repeat N-terminal domain 31 76 IPR013210 -
Phco2g01901 1064 FunFam MDIS1-interacting receptor like kinase 1 797 1007 - -
Phco2g01901 1064 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 242 989 - -
Phco2g01901 1064 ProSiteProfiles Protein kinase domain profile. 712 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01901 1064 SUPERFAMILY RNI-like 287 597 - -
Phco2g01901 1064 Gene3D Ribonuclease Inhibitor 297 390 IPR032675 -
Phco2g01901 1064 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Phco2g01901 1064 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 30 185 - -
Phco2g01901 1064 SMART LRR_typ_2 294 318 IPR003591 -
Phco2g01901 1064 SMART LRR_typ_2 342 366 IPR003591 -
Phco2g01901 1064 SMART LRR_typ_2 438 462 IPR003591 -
Phco2g01901 1064 SMART LRR_typ_2 198 222 IPR003591 -
Phco2g01901 1064 SMART LRR_typ_2 510 534 IPR003591 -
Phco2g01901 1064 SMART LRR_typ_2 558 582 IPR003591 -
Phco2g01901 1064 SMART LRR_typ_2 102 125 IPR003591 -
Phco2g01901 1064 SMART LRR_typ_2 486 509 IPR003591 -
Phco2g01901 1064 ProSitePatterns Protein kinases ATP-binding region signature. 718 742 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01901 Phco-Chr2 49584636 49588905 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phco2g01901 Pkinase 2e-46 CL0016