Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01897 ATGTTGCCCTTTTCCAAGTACTTTTCAATTTCCATGTGCACTGTCGTCCAAATTAAAGGGTCATCAAGGACTCTTTCAGCATCTCAAAAGGGCAAGGGACAGCCACACAGAAGTTATCTTGAATCAGAAAACATGCTGCTAAGAAGCTCTTCAACTCCAGTTCTTGGATCCCTCCTTTCTAACTTCACAGATAGTCCTAACAACAATATTCACTCAGAATCCAGCCATGCACCTAAACACTTTCCACCAACCAGCTTCCCCCAACATTATCACAAACTTTATGTCCACCAAACTGGGTCCTTCACTCTCCCTTCCTTCTCATGTGGTTCTTCTCCAATCTCTCCCTCAATTGGTGAGCTTGAAAGGCAAAACAAAGGCTTTAGAAGAGTTCAATCTGATGGGAACTTGCAAGACTTAGCCTACTCTTGCAACAATGAAGACATTTTGGACTTTTCCGAGCCTCCCAAGAGGTTTTCAACGAGGAACAGGTGCTTGGTGCTGGAGACCATTCCTTCTTTCTCGGTGGGTAAGCACAATGGCTTGCGTGTAGAAGAGGAAGATGAAGAAATGGAAAGTGAGAGCGAAGATGGGGAGGAGAAGAAAGGAGAGGGGTTGACTGTGGTGAATGGAGTGATATGGAGTGAAGCTGGGAAAGCTAAAGATGGAGTTTGCAGGCTTAGTTTTGGTGAGCAGGAAGAGGTTGGTAGTGGTAAAGAAATGTATCTTGCAAAGGGGCTTGGTGTAGAGTGCTGTGGGGATGGCATAGGTGGCTGCATAGGGGGTGGTGGAGGTAGTAGTGATCAAAATCCTTTGGGTTCTGGAGGGAATGATGGAGATAGGCATGAAGTGGAGGAATTTTACAAGAAAATGATGAAAGAAAATCCTGGGGATCCTTTGTTTCTGAGGAATTATGCTAAGTTTTTGTATCAGTGCAAACAGGATCTTGAAGGAGCAGAGGAGTACTATTCCCGTGCCATACTGGCAGACCCAAATGATGGAGATGTTCTATCACAGTATGGGAAGCTAGTTTGGGAGGTACACCATGACCAAGAACGTGCCTCCAGCTATTTTGAAAGAGCAGTCCAAGCCTCTCCTGAAGACAGCCATGTACATGCAGCATATGCTAGTTTCCTATGGGACGCAGAGGAAGAGGAGGATGGTAACAATGAACCACAGTGTTTACCGCCTCATTCTCATCAAGGAGCTATGGCTACAGCAGGTGCTTGA 1227 0.4564 MLPFSKYFSISMCTVVQIKGSSRTLSASQKGKGQPHRSYLESENMLLRSSSTPVLGSLLSNFTDSPNNNIHSESSHAPKHFPPTSFPQHYHKLYVHQTGSFTLPSFSCGSSPISPSIGELERQNKGFRRVQSDGNLQDLAYSCNNEDILDFSEPPKRFSTRNRCLVLETIPSFSVGKHNGLRVEEEDEEMESESEDGEEKKGEGLTVVNGVIWSEAGKAKDGVCRLSFGEQEEVGSGKEMYLAKGLGVECCGDGIGGCIGGGGGSSDQNPLGSGGNDGDRHEVEEFYKKMMKENPGDPLFLRNYAKFLYQCKQDLEGAEEYYSRAILADPNDGDVLSQYGKLVWEVHHDQERASSYFERAVQASPEDSHVHAAYASFLWDAEEEEDGNNEPQCLPPHSHQGAMATAGA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01897 408 SMART hat_new_1 348 380 IPR003107 GO:0006396
Phco2g01897 408 SMART hat_new_1 313 345 IPR003107 GO:0006396
Phco2g01897 408 SMART hat_new_1 278 310 IPR003107 GO:0006396
Phco2g01897 408 SUPERFAMILY TPR-like 278 385 IPR011990 GO:0005515
Phco2g01897 408 MobiDBLite consensus disorder prediction 178 202 - -
Phco2g01897 408 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 45 382 - -
Phco2g01897 408 Gene3D Tetratricopeptide repeat domain 276 389 IPR011990 GO:0005515
Phco2g01897 408 MobiDBLite consensus disorder prediction 385 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01897 Phco-Chr2 49563823 49566123 Dispersed