Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01873 ATGAACGGGTTTTACAAAAGACAACTTGCTTCTCCTCCTGCAGTTGAATTTTCTTCCGATGATGGCAAGTGGTTACTTTCAATGGCGACGGCGGGATTGTATCGACGTCTTCTTCCTTGTCCTCCCGCCGTCGAATTTGCTTCCTCACAAGGCAAGGAACTTTTTCTTGAAGCCATTCACAATGGAACCATGGAAGGTTTTTTCAAATTGGTTTCCCACTTCCAAACGCAATCCGAGCCCGCTTTCTGCGGTCTCGCTAGCTTGTCTATGGTCCTCAATGCTCTTGCCATTGATCCTGGGAGGAAGTGGAAAGGGCCTTGGAGATGGTTTGATGAATCTATGTTGGACTGTTGTGAATCTCTAGAGAAAGTCAAAGTTAAGGGCATCACGTTTGGGAAGCTCGTGTGTTTGGCTCAATGTGCTGGAGCCAAAGTTGATTCGTTTCGTGCTAGCGATAGTAGCATTGATGATTTTCGTAAATATGTCATCAAGTGTTCAATGTCTGATGATTGTCACGTGATCTCCTCATACCATAGAGCTGCCCTTAAGCAAACTGGAACAGGTCACTTTTCTCCTATTGGAGGATATCACGCTGGAAAGGACATGGCACTTGTTTTGGATGTCGCACGATTCAAATATCCTCCCCATTGGATCCCTCTTAAAATTCTCTGGGAAGGTATGAATTATGTCGACGAGGCTACTGGACGAACGAGAGGGTTCATGCTTGTATCAAGACCTCATAGGGAACCTGGCCTGCTTTATACTCTGAGCTGCAAACACGAGAGTTGGATTAATATTGCAAAATTCCTAATGGACGATGTTCCTCTTCTATTAAAATCAGTGGATGTGAAAGACGTTCGTCAGGCTGTTTCAATTATAGTCTCATCACTGCCATCTAATTCTGAACAATTCATCAAGTGGGTTGCAGAGATCAGGAGGCAAGAGGATGGTGGTCCAAGTTTAAGCGCAGAGGAGAAAGCAAGGCTTGCTATCAAGGAAGAGGTATTGAAACAGGTACAGGAGACTGGCCTTTTCAAGCATGTAGCTTCCTTTTTGTCAAATTCTTGCAGCAGGGAATCATTAGATGATGAAGATGCGTTACCTGTCATCGCTGCAAGTGTTTGTTGCCAAGCAGCAGAAATTTTAGCTTGGAAGCCTTGCTCACCAGCCGGGTATAGGTGTCAAGTAACATGTATGAAACGCTTGAAAGCTGAGGATGACAAGCCAATAACAATGGTTTCTGGCACTGTGGTAAATGGTAACACTGAGCAAGGGGTTGATGTGTTGGTTCCTTCATCATGTAGGAAATTATGCGGCAGTTGTTCTAGTCCCAGTGATTATATGAGGATGCATCCAGCTAGCACTGACGTGCTAACTGTGCTTCTACTGTCCTTGCCATCTACAACATGGGCTGGCATCACAGATAAGCAGCTTTTGACAGAAATACACGGTCTAGTTTCAACTGAAAACCTTCCCTCTTTGCTTCAAGAAGAGGTTCTGCACTTAAGACGTCAGCTTCACCTTCTCAAGAGATGTCAAGAGGGCAAGGTTGATCAGGATCTTGGTGCTCCTCTCTCTTAG 1581 0.4491 MNGFYKRQLASPPAVEFSSDDGKWLLSMATAGLYRRLLPCPPAVEFASSQGKELFLEAIHNGTMEGFFKLVSHFQTQSEPAFCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCESLEKVKVKGITFGKLVCLAQCAGAKVDSFRASDSSIDDFRKYVIKCSMSDDCHVISSYHRAALKQTGTGHFSPIGGYHAGKDMALVLDVARFKYPPHWIPLKILWEGMNYVDEATGRTRGFMLVSRPHREPGLLYTLSCKHESWINIAKFLMDDVPLLLKSVDVKDVRQAVSIIVSSLPSNSEQFIKWVAEIRRQEDGGPSLSAEEKARLAIKEEVLKQVQETGLFKHVASFLSNSCSRESLDDEDALPVIAASVCCQAAEILAWKPCSPAGYRCQVTCMKRLKAEDDKPITMVSGTVVNGNTEQGVDVLVPSSCRKLCGSCSSPSDYMRMHPASTDVLTVLLLSLPSTTWAGITDKQLLTEIHGLVSTENLPSLLQEEVLHLRRQLHLLKRCQEGKVDQDLGAPLS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01873 526 Pfam Domain of unknown function (DUF1984) 258 506 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Phco2g01873 526 SUPERFAMILY Cysteine proteinases 41 244 IPR038765 -
Phco2g01873 526 FunFam Glutathione gamma-glutamylcysteinyltransferase 1 42 247 - -
Phco2g01873 526 Gene3D - 43 247 IPR038156 -
Phco2g01873 526 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 28 248 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Phco2g01873 526 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 30 505 IPR040409 GO:0016756|GO:0046872|GO:0046938
Phco2g01873 526 Pfam Phytochelatin synthase 34 240 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01873 Phco-Chr2 49373950 49379259 Tandem