Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01868 ATGGATCATGTTATTGGTGGGAAATTTAAACTCGGAAGGAAAATTGGGAGTGGGTCTTTTGGGGAGCTTTATATTGCTGTTAATATACAAACTGGAGAGGAGGTGGCTATCAAGCTGGAACCTGCGAAGACCAAGCATCCCCAGCTTCACTATGAGTCAAAATTGTATCTGCTTCTTCAAGGAGGAACGGGGATTCCCCATCTCAAGTGGTTTGGAGTAGAGGGAGATTACAATGCCATGGCAATCGATCTTCTTGGACCAAGTCTGGAAGATTTGTTCAATTATTGCAATCGGAAGTTAACATTGAAGACAGTGTTAATGCTTGCTGATCAATTGATTAACAGAGTTGAATATATGCATTCTAGAGGCTTCCTTCACCGTGACATTAAGCCGGACAATTTTTTGATGGGCCTAGGACGTAAAGCAAACCAGGTTTACATCATCGATTATGGCCTTGCAAAGAAATATAGGGATCTTCAGACACATAGGCACATACCATACAGGGAAAACAAGAACCTTACAGGCACAGCTCGGTATGCAAGTGTTAACACTCATCTTGGAATCGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAGGGACTGAAGGCTGGCACCAAAAAACAAAAATATGATAAAATCAGCGAGAAGAAAATGTCAACTCCGATAGAGGTGCTTTGCAAATCGCATCCCTCAGAGTTTGTATCATATTTTCACTATTGCCGATCGTTGCGGTTTGAGGACAAGCCTGATTATTCATATTTAAAGAGGCTTTTTCGAGATTTATTTATTCGAGAAGGCTATCAATTTGACTATGTTTTTGATTGGACTATATTGAAGTATCCACAGATTGGTGGCAGCTCTAGAGGGCGCCATGAAAGTGGCAAGGCAGCTATGCATGCAGGACCATCTGTACAAAAGCCAGAAAAGATATCAGTTGGGAAAGAGATTCGCGAAAAATTCTCTGGTGCTGTTGAAGCTTTCTCTCGGAGGAATCCAACAAGTTCCAGTCCTCGTGGTGATCACTCCAAACATAGGGGTTTTGATGAAGTAGCAGTGCACAAGGATGTGTATCATGAAGAGAAGGGACGGAATTCATCTCGATATGGCAGCAGTTCAAGAAGAGCCGTAATCTCATCATCAACCAGGCCAAGTTCCTCTGGGGATCATACTGACAGTCGTACTGGCCGACTCACCTCAAGTGTGAGCCGTCCATCTACGAGAAACATTCAACCTATGTATGAGACCAAACAACCGACGTACACGCGATCTGGATCTACCAGAGGCAACCGCGATGATCCTCTCCGGAGTTTTGAGCTCCTCTCTATCAGGAAGTAA 1380 0.4355 MDHVIGGKFKLGRKIGSGSFGELYIAVNIQTGEEVAIKLEPAKTKHPQLHYESKLYLLLQGGTGIPHLKWFGVEGDYNAMAIDLLGPSLEDLFNYCNRKLTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMSTPIEVLCKSHPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGGSSRGRHESGKAAMHAGPSVQKPEKISVGKEIREKFSGAVEAFSRRNPTSSSPRGDHSKHRGFDEVAVHKDVYHEEKGRNSSRYGSSSRRAVISSSTRPSSSGDHTDSRTGRLTSSVSRPSTRNIQPMYETKQPTYTRSGSTRGNRDDPLRSFELLSIRK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01868 459 MobiDBLite consensus disorder prediction 301 459 - -
Phco2g01868 459 MobiDBLite consensus disorder prediction 351 382 - -
Phco2g01868 459 CDD STKc_CK1_delta_epsilon 8 282 - -
Phco2g01868 459 PANTHER CASEIN KINASE-RELATED 9 421 - -
Phco2g01868 459 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Phco2g01868 459 FunFam Casein kinase 1-like protein 1 330 - -
Phco2g01868 459 Gene3D Transferase(Phosphotransferase) domain 1 1 336 - -
Phco2g01868 459 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01868 459 MobiDBLite consensus disorder prediction 325 339 - -
Phco2g01868 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Phco2g01868 459 MobiDBLite consensus disorder prediction 383 442 - -
Phco2g01868 459 MobiDBLite consensus disorder prediction 443 459 - -
Phco2g01868 459 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01868 459 FunFam Putative Casein kinase I 1 85 - -
Phco2g01868 459 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Phco2g01868 459 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01868 Phco-Chr2 49335238 49340417 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Phco2g01868 Pkinase 4.5e-25 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01868 2 49335238 49340417 Phco2g01868 2 49335238 49340417 ECH
Phco2g01868 2 49335238 49340417 Phco6g01073 6 10849242 10854882 PCT