Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01866 ATGGATTCTGCAAGGAGTTGGTTACAGAAATTTCAACCACGAGATAAATTAAGAGCCTCCACTAGAAAGAAAGATGATACTCATGGTGGAAACGAAGCTCCAAACGTGCCTATGGACGATGCAACTCTTTCCAATATCACAAAGCAGAAGGTTGCTGCAGCTAAACAATACATTGAAAACCACTATAAGGAACAAATGAAGAGCCTTCAGGAAAGGAAAGAACGTCGAACAATCTTGGAAAAGAAGTTGGCTGATGCTGATGTATCCGAGGAAGATCAAAATAACCTACTTAAATTTTTAGAAAAAAAGGAAACGGAATATATGCGTCTTCAAAGACACAAGATGGGTGTCGATGATTTCGAGTTATTGACCATGATTGGAAAAGGTGCATTTGGGGAGGTCAGAGTTTGTAGGGAAAAGGCTACAGATCATGTATATGCAATGAAAAAGCTAAAGAAATCAGAGATGCTTCGTAGAGGCCAGGTAGAACATGTTAGAGCTGAGAGGAATCTCCTTGCAGAGGTTGACAGCAATTGCATAGTTAAACTTTATTGTTCTTTCCAAGATGATGAGTATTTATATCTTATTATGGAATATCTACCTGGTGGGGATATGATGACTCTACTCATGAGAAAGGATACCTTGACTGAAGATGAAGCCAGATTTTATGTGGGAGAAACAGTTCTAGCTATTGAATCAATACATAAACGCAATTATATACATAGGGATATTAAGCCTGATAACTTGTTACTTGATAAATATGGACACTTGAGACTGTCTGATTTTGGATTGTGTAAACCATTAGACTGTAGTACACTTGAAGAAACGGATTTTTCCACTAGTCAAAATACAAATGGAATTGTACAAAATGATGAATCTGGACGGACACAACAAGAACAATTGCAACATTGGCAAAAGAATAGGAGGACACTTGCTTATTCTACTGTCGGTACACCAGACTATATTGCTCCAGAAGTTCTATTAAAGAAAGGCTATGGAATGGAATGTGATTGGTGGTCACTTGGTGCTATTATGTATGAAATGTTGGTGGGATATCCGCCTTTTTATTCTGACGATCCAATGTCAACATGTAGGAAGATAGTAAATTGGAAATCTCATTTAAAGTTTCCTGAAGAAGCAAGGTTAACTATAGAGGCTAAAGATCTTATAAGTAAGCTTTTATGTAATGTGAACCAGAGACTGGGCTCAGATGGTGCAGATGAAATAAAGGTTCATCCATTTTTTAATGGTGTTGAATGGGAAAGATTGTATCAAATGGAAGCTGCATTTATTCCAGAGGTCAACGATGAGTTAGACACTCAAAATTTTGAAAAGTTTGATGAGTCTGATCACCAGGCTCAATCATCAGCAAGAGCTGGCGGTCCATGGAGGAAGATGCTTTCATCTAAAGACTTGAATTTTGTGGGATACACATACAAAAACTTTGAAATTGTCAACGACTATCAAGTTCCTGGAATGACTGAATTAAGGAAGAAAACTTCAAAAGTAAAAAGGCCATCCGTCAAGTCCCTCTTTGATGGTGATTCTGAAACATCAGAGGCTTCTGATTCAATTGCAAGCACAACTAAAAAGTTTGATGATCCACCTACTAATTCAGAATAG 1623 0.3752 MDSARSWLQKFQPRDKLRASTRKKDDTHGGNEAPNVPMDDATLSNITKQKVAAAKQYIENHYKEQMKSLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKATDHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKRNYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLEETDFSTSQNTNGIVQNDESGRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEARLTIEAKDLISKLLCNVNQRLGSDGADEIKVHPFFNGVEWERLYQMEAAFIPEVNDELDTQNFEKFDESDHQAQSSARAGGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMTELRKKTSKVKRPSVKSLFDGDSETSEASDSIASTTKKFDDPPTNSE 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01866 540 Gene3D Transferase(Phosphotransferase) domain 1 204 433 - -
Phco2g01866 540 SMART pkinase_C_6 416 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phco2g01866 540 FunFam Non-specific serine/threonine protein kinase 204 271 - -
Phco2g01866 540 FunFam Non-specific serine/threonine protein kinase 314 433 - -
Phco2g01866 540 MobiDBLite consensus disorder prediction 9 30 - -
Phco2g01866 540 MobiDBLite consensus disorder prediction 499 540 - -
Phco2g01866 540 SUPERFAMILY Protein kinase-like (PK-like) 93 457 IPR011009 -
Phco2g01866 540 CDD MobB_NDR_LATS-like 54 115 - -
Phco2g01866 540 MobiDBLite consensus disorder prediction 512 540 - -
Phco2g01866 540 FunFam Non-specific serine/threonine protein kinase 91 203 - -
Phco2g01866 540 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 468 - -
Phco2g01866 540 Pfam Protein kinase domain 121 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01866 540 Pfam Protein kinase C terminal domain 434 479 IPR017892 GO:0004674|GO:0005524|GO:0006468
Phco2g01866 540 Gene3D Phosphorylase Kinase; domain 1 118 444 - -
Phco2g01866 540 SMART serkin_6 120 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01866 540 ProSiteProfiles Protein kinase domain profile. 120 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01866 540 MobiDBLite consensus disorder prediction 1 42 - -
Phco2g01866 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Phco2g01866 540 ProSiteProfiles AGC-kinase C-terminal domain profile. 416 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phco2g01866 540 CDD STKc_NDR_like 118 480 - -
Phco2g01866 540 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01866 Phco-Chr2 49306715 49311405 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Phco2g01866 Pkinase 6.6e-63 CL0016