Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01861 ATGGGTCTCAGAGACATTGGTGCTTCACTGCCTCCTGGGTTTCGCTTTTTTCCCAGTGACGAGGAATTGGTCTGCCATTACCTCTACAAAAAGATCGCAAATGAGGATGTTCTCAAGGGTACCTTGGTGGAAATTGACCTCCACATATGTGAGCCATGGCAACTTCCAGAGGTGGCTAAGCTGAATGCGAACGAGTGGTACTTCTTCAGCTTCCGGGACCGCAAATACGCGACGGGGTTTCGAACAAACCGCGCAACCACATCAGGGTATTGGAAAGCAACAGGGAAGGATCGAACGGTGGTGGATCCAACCACGCAAGAGGTTGTAGGGATGAGGAAAACGCTGGTGTTCTACAGGAACAGAGCTCCAAATGGCATCAAAACCGGGTGGATCATGCATGAGTTCCGCTTGGAGACCCCACACATGCCTCCAAAGGAGGACTGGGTGCTGTGTAGAGTCTTCCACAAAAGCAAAGAAGATAACAATGGTTCCAAACTGATGTACGAATATGATACAACACCTCAATCCCTAACCTTGGCTTCGTCATCTCCCACCAACCAAACCATGCCTGGTGGGTACAACAGATTTCCCACCTCTTTCACTTCCTCCATGCCATTGCCAACCCACCACCACCACCATCATCATTTCAACACAAACCAAAACTCTTCTTTCATGGATCTCCTTCACTTCTCTCGGGACACCAACACCAACAACTCCATCGTTACTCAAATTAGTTCCAAAGGAGATGATGGGTATGGTTTCTTGTGGGACATGGATCTAGAAGAAAATAGCCTAGAAGATGCCGTGGCTTCAAACTTGGACGCAATAACGTTTGAGATTGATAATAATCACAATGATAATAATATGGTATTCCTATAA 879 0.4699 MGLRDIGASLPPGFRFFPSDEELVCHYLYKKIANEDVLKGTLVEIDLHICEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPTTQEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKEDNNGSKLMYEYDTTPQSLTLASSSPTNQTMPGGYNRFPTSFTSSMPLPTHHHHHHHFNTNQNSSFMDLLHFSRDTNTNNSIVTQISSKGDDGYGFLWDMDLEENSLEDAVASNLDAITFEIDNNHNDNNMVFL 292
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01861 292 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Phco2g01861 292 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 219 - -
Phco2g01861 292 Gene3D NAC domain 19 162 IPR036093 GO:0003677|GO:0006355
Phco2g01861 292 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Phco2g01861 292 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco2g01861 Phco-Chr2 49242749 49248956 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco2g01861 NAM 7.4e-37 No_clan