Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01836 ATGGTGATAAGTGATTATGATTTGCACAAGATTGAAGAGACCCAGAAACAGCCCAAAATCCTAAAAGACCACAAACCCCCCAACCAAAAGGCCAACATGACTGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGGAAGTGTGTGAGAGGTTGTGTTTTTGCTCCTTACTTCTGCCATGAACAGGGTGCCACCCATTTTGCAGCCATTCATAAGGTCTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCTCACCTTCCTGTGAGTGACCGTTGTGAAGCTGCTGTCACTATCTCTTATGAAGCTCAAGCTAGACTTCAAGATCCAATTTATGGTTGTGTCGCTCATATTTTTTCACTCCAACAACAGGTGGTGAATTTACAAGCACAACTAGTTCATCTCAAGGAACAGGCAGGTCAGATCTATCTCAATGCCTCTGCCACTGATACCTCTAATGAGAAATACTTAGGAAAATCTACCAATTTTCCCCAATATCTTGAGAGTTGGTTCCAGACGGAGAATTCCAACTCGGCTTCACAATTTCTTCCTAAATTGTCCACCAATACTTCAACACAGTATTATGGAAATACTAATACCTTCATGGACCCAAACCCTATTGGAAATGATGATGACAATTCCGTAACAGTAGCGGAAAGCATCTCCTTTTCTAGCTTTGAAGAGAGTTGTAACTCCATGTCCTGTGACATGCAAAGGCAGTGGACCTTTTATCAAGTGGATAACCTTCAATAA 750 0.4227 MVISDYDLHKIEETQKQPKILKDHKPPNQKANMTGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVAHIFSLQQQVVNLQAQLVHLKEQAGQIYLNASATDTSNEKYLGKSTNFPQYLESWFQTENSNSASQFLPKLSTNTSTQYYGNTNTFMDPNPIGNDDDNSVTVAESISFSSFEESCNSMSCDMQRQWTFYQVDNLQ 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01836 249 Coils Coil 117 137 - -
Phco2g01836 249 PANTHER LOB DOMAIN CONTAINING PROTEIN 34 216 - -
Phco2g01836 249 ProSiteProfiles LOB domain profile. 36 138 IPR004883 -
Phco2g01836 249 Pfam Lateral organ boundaries (LOB) domain 37 135 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01836 Phco-Chr2 48903046 48903903 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco2g01836 LOB 8.8e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01836 2 48903046 48903903 Phco2g01836 2 48903046 48903903 ECH
Phco2g01836 2 48903046 48903903 Phco6g01031 6 10249639 10251866 PCT