Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01829 ATGGACTTAAACTATCCACAAGACCATGATCTGGTGGGAACTGGGAGATCCTACGAGTGCATCTTTTGCAAGAGAGGCTTCACCACAGCTCAAGCCTTAGGTGGACACATGAACATACACAGAAAAGAAAGGGCCAACAAGACCAAACCCACTTTCCCTCCTCCTCCTTCAACTTCTAACAAACCTGATGGAATCAACAACTATGCAGATCTCCTCTTCCATTCACAAATTCCAACGCACTCCACTGCTCCTGATGCTAATAGCTTCCGTGATGTTTGTTTTTCAGCCACTGCGCTGAGTGTTAGACCTTCCCATGGTGAGGTTTTGTGTGCAGAAAAAAATCAACTGGGACACGTGTTTGTGCAGGATTGGAGGACCAGAAATTTTAGCTTGTACACTAATCCTTTGTGTTTTCATGAAATGAACAAGTTTGAAGACACTGAAGAGAATGGCCTGGATTTGGAGCTGAGGTTGGGTCATCATCCATAG 489 0.4479 MDLNYPQDHDLVGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANKTKPTFPPPPSTSNKPDGINNYADLLFHSQIPTHSTAPDANSFRDVCFSATALSVRPSHGEVLCAEKNQLGHVFVQDWRTRNFSLYTNPLCFHEMNKFEDTEENGLDLELRLGHHP 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01829 162 Pfam C2H2-type zinc finger 18 43 - -
Phco2g01829 162 Gene3D Classic Zinc Finger 9 60 - -
Phco2g01829 162 PANTHER OS07G0101800 PROTEIN 15 161 - -
Phco2g01829 162 MobiDBLite consensus disorder prediction 41 64 - -
Phco2g01829 162 ProSitePatterns Zinc finger C2H2 type domain signature. 20 40 IPR013087 -
Phco2g01829 162 SUPERFAMILY beta-beta-alpha zinc fingers 16 45 IPR036236 -
Phco2g01829 162 ProSiteProfiles Zinc finger C2H2 type domain profile. 18 45 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01829 Phco-Chr2 48842811 48843299 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01829 2 48842811 48843299 Phco2g01829 2 48842811 48843299 ECH
Phco2g01829 2 48842811 48843299 Phco6g01024 6 10166719 10167312 PCT