Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01804 ATGTTCACATCTCAAGACCTCCACTGTGTCTGTCTCCTCCAAGATACCTCACTTCACAGAATTCACACCATGCAACAATTTCACCCCACACCTTCCCACGCCGCCTCTTCCCTAGCAAAGTTCGGCAAGAAACGCGGTAGCTACAATTGCGGTCGCTGCGGTCTCCCTAAGAAGGGCCATATCTGCACCGTCGGGACCCCCGCCAACTCTTCTTCCGCCACCCCTTCCCACTCCTCTCTCTCCGTGGTGACATCTGCTCCTTCCTCTATCTCTGTCTCTGTCGCCCGCCGCCTTCCTCTCCTGCCCCGTCGCGCTCTCTCCTTTGATCACGAAGAAGCCGGCGGACTCGATCCATCGGAGTCCGCCTCCGTGTGGTCCCAAGAGGATGATTTTGATTCGTCTGGGTTGCCAGGGAATGTTCTTTGGGACATACTAAGGAGGCTTCCGCCGTCGGGGCTCCTAGCGGCGGCGAAGGTGTCCAGAGGCTGGAGGGATATGACGAGGAGTTTGTGGAAGGCAGCGGAGGAGTTAAATCTTAGGGTTCCGGCGAGTGTTCAGGTGGGTTTCGTGGCGTCGATGTTGCAGAAGTGTCCGGGGATTGTAAATCTCTCTCTTGTAATGGAAAGTGACGTGGTTTCGACGATGCTGGCTTGCATTGCATTTTCGTGCCCTAATTTGGCATTCTTGGAGATTTCGGTTTCTGATTCTGCAGTCAATCGAATCACCGGGAGTGAGTTAGGTCGATTTGTTGCTGATAAAAAGAGCCTCAAAAGCCTTAAGATGGAAGGTTGTTCTAACCTTGGAGGCTTCGTTCTTTGTTCTTCTAGTCTTTCTACCATTTGGCTGTCGGATCTGTACTCTCTTTCTAAGATGGTTTTTAATTGTCCTCAATTGAAAGAGATTTCATTGAAGTTTTCTCAACGAGAAAAGGACAGCACTGATCTTGCAACCATGGTTGAAGGTTTGGGAATAAGTTGCCCTAGGTTGCAAAACATACGTATATATTCAATGCAACTTTCTCATGCTGCTGTGCTCGCTCTTACTGCTGCTCACTTAAGGGGCCTGCGAATGCTTTCACTCGTTTTTGGATCTGAAGTTACTGATGCATCTGTCGCTGCCATTGCCTCAAGCTATCCAAATCTGGAATTGCTCGATCTCAGTGGATCCAGCGTCAGTGACAGTGGCGTTAGCATGATTTGCAATGTGTTCTCTGAAACATTGACAAGACTCCTTCTAGCTGTTTGCCCTAATGTGACTTCAAGTGGCATTCAATTTGCTACGGCTCAATTGCCACATCTTGAAATTATGGACTGTGGCATGACAATATGTGAACCCGATTCTCACAATCCAATTGCTGATGAAAATAACCACAAACTACAGAAGACATCTATTACTAATCTACACCTTACAAACCAAAAGCTAATCATCAAACACAGCTGTTTAAAGAAACTTAGTTTATGGGGATGTTCGGGCTTGAATGCCTTATATTTAAACTGCACTCAACTCAAGGATTTGAATCTAAATTCTTGTAGAAATTTGCATCCAGAGAGACTGTTGCTTCAGTGCCCTAGTTTAGAAAATGTGCATGCATCTGGTTGTCACGACATGTTAACAGGGGCTATACAAAGTCAGGTTTGCAATGCTTTTACTGATTTGGAAAACCCTTCAACTAGTAAGCGTTTACCTAATGGCTCCAAAAGGGTTCGGGTCCCTCATTTAGACAATACTGAGTCGCCCGATGAAGAAACGAAGCGAAGTAGAAAAAAGAGACGACTTTGTAACGTGCTCCTGGATTGA 1797 0.468 MFTSQDLHCVCLLQDTSLHRIHTMQQFHPTPSHAASSLAKFGKKRGSYNCGRCGLPKKGHICTVGTPANSSSATPSHSSLSVVTSAPSSISVSVARRLPLLPRRALSFDHEEAGGLDPSESASVWSQEDDFDSSGLPGNVLWDILRRLPPSGLLAAAKVSRGWRDMTRSLWKAAEELNLRVPASVQVGFVASMLQKCPGIVNLSLVMESDVVSTMLACIAFSCPNLAFLEISVSDSAVNRITGSELGRFVADKKSLKSLKMEGCSNLGGFVLCSSSLSTIWLSDLYSLSKMVFNCPQLKEISLKFSQREKDSTDLATMVEGLGISCPRLQNIRIYSMQLSHAAVLALTAAHLRGLRMLSLVFGSEVTDASVAAIASSYPNLELLDLSGSSVSDSGVSMICNVFSETLTRLLLAVCPNVTSSGIQFATAQLPHLEIMDCGMTICEPDSHNPIADENNHKLQKTSITNLHLTNQKLIIKHSCLKKLSLWGCSGLNALYLNCTQLKDLNLNSCRNLHPERLLLQCPSLENVHASGCHDMLTGAIQSQVCNAFTDLENPSTSKRLPNGSKRVRVPHLDNTESPDEETKRSRKKRRLCNVLLD 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01804 598 Gene3D - 127 169 - -
Phco2g01804 598 ProSiteProfiles F-box domain profile. 130 174 IPR001810 GO:0005515
Phco2g01804 598 SMART LRR_CC_2 499 522 IPR006553 -
Phco2g01804 598 SMART LRR_CC_2 326 350 IPR006553 -
Phco2g01804 598 SMART LRR_CC_2 352 377 IPR006553 -
Phco2g01804 598 SMART LRR_CC_2 378 402 IPR006553 -
Phco2g01804 598 Pfam F-box domain 134 169 IPR001810 GO:0005515
Phco2g01804 598 FunFam Uncharacterized protein 129 314 - -
Phco2g01804 598 Gene3D Ribonuclease Inhibitor 447 574 IPR032675 -
Phco2g01804 598 MobiDBLite consensus disorder prediction 570 587 - -
Phco2g01804 598 Gene3D Ribonuclease Inhibitor 170 438 IPR032675 -
Phco2g01804 598 MobiDBLite consensus disorder prediction 557 587 - -
Phco2g01804 598 SUPERFAMILY F-box domain 131 181 IPR036047 GO:0005515
Phco2g01804 598 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 163 492 - -
Phco2g01804 598 SUPERFAMILY RNI-like 190 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01804 Phco-Chr2 48561544 48566293 Dispersed