Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01795 ATGGAGTCTCACGGCGGAGGACCCCTTCGTTCCCGCAGTTCCCAGTCCCCTTCTCCTTCCCACTCCGCCTCAGCCTCCGCCACATCCTCCATCCACAAGCGCAAGCGCGCGTCTGAGGACCACGTGCCTCCCTTCCCGCCCTCCTCCTTCTCCGCCGACACGCGCGACGGCGCCCTCACCTCCAATGACGACCTGGAGAGCATCTCCGCCCGAGGCGCCGACTCCGACTCAGACGATGACTCGGAGGACGCCGTCGTCGACGATGACGAGGACGACTACGACAACGACTCCTCCATGCGCACCTTCACCGCCTCCAGACTCGGTAATCCTCCCTCCGCTCCCCGCAATTCAAAGCTCAAGACTGATAACTCCGCCGTCAAAATTGAGAACTCCGACGGCGCAAAAGACGCCGCAAACGCCGTAGCCGGTGCCGCCGAGGCCGTTGGATCCGTCCCTGGCATTGTGGTTAAGGAGGACCCGACTAAGATTTTTACTGATAATTTGCAAACGAGTGGGGCTTACACAGCTCGGGAAGAGAGTCTCAAGAAGGAGGAAGAAGCGGGAAGGCTTAAATTCGTATGCCATTCAAACGATGGTGTTGATGAGCATATGGTCTGGTTGATTGGATTGAAGAATATATTTGCTAGACAACTTCCCAATATGCCCAAGGAGTACATTGTCCGGCTTGTCATGGATAGGAGCCACAAGTCTGTAATGGTTATCAGGCGTAATCACGTTGTTGGAGGCATTACATATCGCCCATATGCTAGCCAGAAGTTTGGTGAGATAGCCTTTTGTGCAATTACAGCTGATGAGCAAGTAAAGGGTTATGGTACCAGATTGATGAATCACTTAAAGCAGTATGCACGTGATGTGGATGGGCTGACACATTTTCTCACATATGCTGACAACAATGCTGTTGGCTATTTTATCAAACAGGGATTTACAAAAGAGATTCACTTGGAGAAAGATCGATGGCAAGGTTATATAAAGGATTATGATGGAGGAATTCTCATGGAATGCAAGATAGATCCAAAGCTCCCTTACACTGATTTGTCAACTATGATCCGTCGTCAAAGGCAGGCTATTGATGAAAAAATCAGAGAGCTGTCAAACTGTCACATAGTCTATGCCGGAATTGATTTTCAGAAGAAAGAAGCTGGCATTTCGAAAAAAATTATTGATGACATCCCCGGTTTGAGGGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCACGATTCAGAAGTCTAAATGTCTCTACTGACAATAGCGCTAATCAAAAACATTTGTCTACTTTTATGCGATCACTTCTAAAGTCAATGCATGATCATGCCGACGCATGGCCGTTCAAGGAACCAGTTGATGCACGGGATGTTCCTGATTATTATGACATCATCAAAGATCCAATGGATTTGAAGACAATGTCCAAGAGGGTGGAGTCAGAGTTATATTATGTAACATTTGAGATGTTTGTTGCGGATGTCAGAAGAATGTTTGCGAATGCGCGCACCTATAATTCTCCAGAAACCATTTATTACAAATGTGCTACAAGGTTAGAATCCCACTTTCAAAGCAAAGTACAAGCGGGTCTCCAGCCTGGTTCCAAAATTCAGTAG 1620 0.4809 MESHGGGPLRSRSSQSPSPSHSASASATSSIHKRKRASEDHVPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDDDSEDAVVDDDEDDYDNDSSMRTFTASRLGNPPSAPRNSKLKTDNSAVKIENSDGAKDAANAVAGAAEAVGSVPGIVVKEDPTKIFTDNLQTSGAYTAREESLKKEEEAGRLKFVCHSNDGVDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYASQKFGEIAFCAITADEQVKGYGTRLMNHLKQYARDVDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYAGIDFQKKEAGISKKIIDDIPGLREAGWTPDQWGHSRFRSLNVSTDNSANQKHLSTFMRSLLKSMHDHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMSKRVESELYYVTFEMFVADVRRMFANARTYNSPETIYYKCATRLESHFQSKVQAGLQPGSKIQ 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01795 539 SUPERFAMILY Bromodomain 417 529 IPR036427 GO:0005515
Phco2g01795 539 CDD NAT_SF 237 291 - -
Phco2g01795 539 MobiDBLite consensus disorder prediction 1 123 - -
Phco2g01795 539 MobiDBLite consensus disorder prediction 8 31 - -
Phco2g01795 539 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 197 344 IPR000182 GO:0016747
Phco2g01795 539 PANTHER GH11602P 86 536 IPR037800 GO:0004402
Phco2g01795 539 Pfam Bromodomain 436 518 IPR001487 GO:0005515
Phco2g01795 539 CDD Bromo_gcn5_like 431 530 - -
Phco2g01795 539 Gene3D - 186 350 - -
Phco2g01795 539 Gene3D - 421 535 IPR036427 GO:0005515
Phco2g01795 539 PRINTS Bromodomain signature 495 514 IPR001487 GO:0005515
Phco2g01795 539 PRINTS Bromodomain signature 446 459 IPR001487 GO:0005515
Phco2g01795 539 PRINTS Bromodomain signature 460 476 IPR001487 GO:0005515
Phco2g01795 539 ProSiteProfiles Bromodomain profile. 443 514 IPR001487 GO:0005515
Phco2g01795 539 SMART bromo_6 424 533 IPR001487 GO:0005515
Phco2g01795 539 FunFam Histone acetyltransferase KAT2A 187 351 - -
Phco2g01795 539 MobiDBLite consensus disorder prediction 53 68 - -
Phco2g01795 539 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 205 349 IPR016181 -
Phco2g01795 539 MobiDBLite consensus disorder prediction 98 123 - -
Phco2g01795 539 MobiDBLite consensus disorder prediction 76 95 - -
Phco2g01795 539 Pfam Acetyltransferase (GNAT) family 237 315 IPR000182 GO:0016747
Phco2g01795 539 ProSitePatterns Bromodomain signature. 448 506 IPR018359 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01795 Phco-Chr2 48484980 48491865 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco2g01795 Bromodomain 8.1e-21 No_clan