Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01760 ATGATGCCAAACATGCCGCCAACCGGAGAAAGAAGAAGAAAAAGAAACAACCTTAGCCGCTTGAACTTGAACTTGAACCTATGTTTCTCAATTCCCATGCAACCGTTCACACCACAATCTCACCCTACAATCCCTACCGCCACCTCTTCAACCCTTCTTCAAAATCAAAATCAAAACCCTCCATCACAACCCGCCACGTCACCGTCCCCGATCAAAAACTTCAACTACGATCCTACTAACCCATTCCCGAGCCTAGGACCCGAACTCGAACCCGAACCTGCTGACCTGGCCTCCGCCTTCGTCTCCCAACGCTTCTTCTTCACCGACCCCGGCCGCTCCAACTCCATCGTCGAATCCACCATCACCGACGCCGATTGCGCCACCTCCTCATCCTCGCTTGAAAAACCCGTCGCCACTGTCGACGAGAAGGCGAAAGCTGCGCTTGACGGCAGCGTTGCGGTGGAGATGTACTCGCCGAACCCCTACGCGGATTTCCGGCGCTCCATGGAGGAGATGGTGGCGGCGCGCCCCGAGTTGATGGACGTGGCGGCCAATTGGAAAGCGTTGCACGAGCTTCTTCTCTGCTACCTGGCGCTCAACCCGAGGAGCACTCACAAGTTCATCCTCTGCGCTTTTTCTGATCTTCTTCTCAGCCTCATCTCGCTCTCTTCTCCTCCGCTGCAGGATCCCGGTGCGGGCGACGTTGCCGTCGGTGGTGATGGATGTTCGATTTAG 735 0.5592 MMPNMPPTGERRRKRNNLSRLNLNLNLCFSIPMQPFTPQSHPTIPTATSSTLLQNQNQNPPSQPATSPSPIKNFNYDPTNPFPSLGPELEPEPADLASAFVSQRFFFTDPGRSNSIVESTITDADCATSSSSLEKPVATVDEKAKAALDGSVAVEMYSPNPYADFRRSMEEMVAARPELMDVAANWKALHELLLCYLALNPRSTHKFILCAFSDLLLSLISLSSPPLQDPGAGDVAVGGDGCSI 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01760 244 ProSiteProfiles OVATE domain profile. 154 218 IPR006458 -
Phco2g01760 244 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 60 219 IPR038933 GO:0045892
Phco2g01760 244 MobiDBLite consensus disorder prediction 52 91 - -
Phco2g01760 244 MobiDBLite consensus disorder prediction 52 80 - -
Phco2g01760 244 NCBIfam uncharacterized plant-specific domain TIGR01568 152 220 IPR006458 -
Phco2g01760 244 Pfam Transcriptional repressor, ovate 158 219 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01760 Phco-Chr2 48086324 48087058 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phco2g01760 Ovate 3.6e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01760 2 48086324 48087058 Phco2g01760 2 48086324 48087058 ECH
Phco2g01760 2 48086324 48087058 Phco6g00952 6 9284119 9284766 PCT