Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01691 ATGCCACTGTTCCCGATCCTTGTCACCATCTTCCTCACTCTCCCTGCCCTTTCCCTCTCCGTTTCCTGTCCTCTCAACATCACCCTCTTCCGTTCCAGACCCTCCTCCGACCCCAAGACACGGTGCCGTTACATCCTCCAATCCCTGCGTATTCTTCAATCCGATTATCTCCGCCGCACCGGTTTCTTCCCTCCTTCCAACGCCTCCTTCTCTTGCTGGAACACTCTCCAATCTCACACCCACCAATACGACATTCGCTCCTCCTGCAATCTATCTTCCTCTTCCATTTCCCTCTCCTGCAACAACATCTCCACCCGATCCCAATTCCAGGACCCTCTTCCTCTCTCAGCTCTTAAACCCGTCTGGAATGCTTGTAACCAATCTCTCAACAGTGCCGCATCTTGTGCTCTCTGCACCAACGCTTTGTCCAACTTGGATTCCCACATCACCGACAATACCACTGATTGCAAGAGTATTGCTTCTATCTATGCTGCTTCCTTCTCCGACCTGCAAGGCCCTGGAACTACTGAGTGTTTGTTCAGCCTTGGTTTTTCTTCTTCGGTTTCCACTAGTAAGCGTCGAACCATTCTTATTGTGGTTTTTTGTGTGCTGGCCTTCTTCTTGTTGCTTTTCTTTGGTATTTTTTGGGCTTACTTTAGATTGAAGCAGAAAAAGGATATTTGTAAAACTGAGATGGATTTGGGTTCTGGGTTGGATTCTATGAACCATAGTACTACTTTGATCAGGTTCACCTTTGATGAGATTAAAAAGGCTACTAGGAATTTCGCCTTTGATAACATAATTGGGAAGGGGGCTTATGGGAATGTTTATAGAGGGCTGTTGTTTGATGGTACTCAGGTTGCATTGAAAAGGTTTAAGAATTGTTCTGTTGCTGGGGATGCTAGCTTCACTCATGAAGTTGAGGTTATTGCAAGCGTTAGGCATGTGAACCTTGTTACCTTGAGAGGGTATTGTACTGCTACAACTAATTTAGAGGGTCACCAGAGGATTATCGTAACTGATTTGATGGAGAATGGGAGCGTTTATGATCATTTATTTGGTTCTGCTAAGCAGAAACTGAGTTGGCCAATTCGTCAAAAGATTGCTCTAGGCACTGCTAGGGCGTTGGCTTATTTGCACTATGGGGCTCAACCTTCCATCATCCATAGGGATATTAAAGCTAGTAACATACTTCTGGACCGCAAGTTTGAAGCCAAGGTAGCGGATTTTGGATTAGCGAAGTTCAACCCTGAGGGAATGACGCATATGAGCACTAGAGTGGCTGGAACCATGGGGTATGTGGCACCTGAGTATGCTTTGTATGGACAGTTGACAGAGAGAAGTGATGTGTTCAGTTTTGGGGTTGTGCTTCTTGAGCTTTTGAGTGGGAGAAGGGCTCTTCAAATTGACACTGATGAGCAACCCTCTGCAGTCAATGACTTTGCTTGGTCATTGGTTAGGAATGGTAAAGCTTTGGACGTTATTGAAGATGGTATGCCAGAACTTGGTCCAACAGAAATTGTTGAGAAGTATGTATTGGTTGCTGTACTATGTTGTCATCCACAACTACATGGTAGGCCAACAATGGACCAGGTTGTTAAAATGCTAGAGACAGAGGAATCACTGTCCTCGTTAATTCAACAGCCAATGTCTTGTATTGCTGGGAGGATTGATACTGAGAAATCTGTGTAG 1692 0.4527 MPLFPILVTIFLTLPALSLSVSCPLNITLFRSRPSSDPKTRCRYILQSLRILQSDYLRRTGFFPPSNASFSCWNTLQSHTHQYDIRSSCNLSSSSISLSCNNISTRSQFQDPLPLSALKPVWNACNQSLNSAASCALCTNALSNLDSHITDNTTDCKSIASIYAASFSDLQGPGTTECLFSLGFSSSVSTSKRRTILIVVFCVLAFFLLLFFGIFWAYFRLKQKKDICKTEMDLGSGLDSMNHSTTLIRFTFDEIKKATRNFAFDNIIGKGAYGNVYRGLLFDGTQVALKRFKNCSVAGDASFTHEVEVIASVRHVNLVTLRGYCTATTNLEGHQRIIVTDLMENGSVYDHLFGSAKQKLSWPIRQKIALGTARALAYLHYGAQPSIIHRDIKASNILLDRKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGRRALQIDTDEQPSAVNDFAWSLVRNGKALDVIEDGMPELGPTEIVEKYVLVAVLCCHPQLHGRPTMDQVVKMLETEESLSSLIQQPMSCIAGRIDTEKSV 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01691 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Phco2g01691 563 Gene3D Phosphorylase Kinase; domain 1 227 341 - -
Phco2g01691 563 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 222 341 - -
Phco2g01691 563 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 54 549 - -
Phco2g01691 563 Pfam SPARK 20 153 IPR043891 -
Phco2g01691 563 SUPERFAMILY Protein kinase-like (PK-like) 238 537 IPR011009 -
Phco2g01691 563 SMART serkin_6 262 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01691 563 Pfam Protein tyrosine and serine/threonine kinase 264 536 IPR001245 GO:0004672|GO:0006468
Phco2g01691 563 ProSitePatterns Protein kinases ATP-binding region signature. 268 290 IPR017441 GO:0005524
Phco2g01691 563 Gene3D Transferase(Phosphotransferase) domain 1 343 551 - -
Phco2g01691 563 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 343 544 - -
Phco2g01691 563 CDD STKc_IRAK 268 537 - -
Phco2g01691 563 ProSiteProfiles Protein kinase domain profile. 262 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01691 Phco-Chr2 47283599 47285290 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Phco2g01691 PK_Tyr_Ser-Thr 1.8e-42 CL0016