Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01690 ATGTCCCTTCCCTTTTTTTTCTCCCTCTTTTTTATTTTTTCTTTTTCATTTATTCTTCCGCTTCCTTCTCTCGCCGCCAACGACACCGTTCCCTGTCCCCTCAACATCACCGTGCTCCGCGTCGTGGGCGGCGGCGCCCGTCCCTCCTTCGACTCCGGTACGCAGTGCCATTACATCCTGCAGGCCCTCCACCTCCTCCAGGCTGACTACCTCCGCCGCAGCAACCTCTTCGTGCCGCCGCTCAACGCCTCCGAGTCCTGCTGGACCTCCTTCCAGTCCTTCATCAACGAATTCGATCCGAACATCGATATCCGCTCCTCCTGCGGCCTCAAAACCGAGTGGATCTCCCAAGGCTGCATGAACATCACCACCAAACAGAAGTTCGAAGCCACCGTCCCCTCCGCCGCAATCCAGGCTGTCCAAGGCAACTGCAACCAGTCCCTCGAAAACAACGCCCCCTGCGCCCTCTGCACCACCAAACTCTCCAACCTTCTCTCCTACTTGACCGGCCCAACCGTCGGAAACGTCACCGATTGCCGAGCCTATACCTCGATCTACGCCGCTTCTCTCTCTGACCAGTATGGTGCCACTGACCCTGGAACCGCCAAGTGTCTCTTCGGCCTCGATTTTTCCTCCTCCAGTTCCAGCAGCAAGCGCCGAACCATTGTTATCGTGGTTTCCGTTTTCTGTTTTGTGGCTTTGCTTGTTTTTGCTGGGGTTTGGACTTACCTTAGATTCAAGAGGAGGAACGAGTTTGCGGGAGAGAAGGGTGTCGGAACATCTGAACTTGGTTTGGGTTCAGGGTTGGATTCGATGAACCAGAGTACCACTTTGATTAGGTTCAGTTTTGATGACATTAAAAAGGCTACTAGGAACTTCTCAAGAGATAACATGATCGGGAGTGGGGGTTATGGGAATGTTTATAAAGGGATGTTGCAAGATGGTAGTCCAGTTGCTTTTAAAAGGTTCAAGAATTGTTCTGTTGCCGGGGATGCTAGCTTCACTCACGAAGTTGAGGTTATTGCGAGTGTTCGCCATGTGAATCTTGTCACCTTAAGAGGTTATTGTACTGCCACGACCAACTTAGAGGGGCACCAGAGGATTATTGTGACTGATTTGATGGAAAATGGGAGTCTTTATGATCATTTATTTGGTTCTTCTAAGAAAAATCTGAGTTGGCCTATTCGTCAGAAGATTGCTCTCGGGACTGCTAGAGGGTTGGCTTATTTGCATTATGGGGCTCAACCTTCCATCATTCATAGGGATATTAAAGCTAGTAACATACTTCTGGACCATAAGTTTGAAGCCAAGGTGGCGGATTTCGGGTTGGCCAAGTTCAACCCTGAGGGAATGACACATATGAGCACTAGAGTGGCTGGGACTATGGGGTATGTTGCTCCTGAGTATGCCTTGTATGGACAGTTGACAGAGAGAAGTGATGTGTTCAGTTATGGTGTTGTGCTTCTTGAGCTTTTGAGCGGGAAAAAGGCTCTTCAAACGAACGATGATGGGCAACCCTCCGCACTCACTGACTTAGCTTGGTCGTTGGTTAGAAACGGTAGTGCTTTGGATGTTGTTGAAGATGGCATTCCAGAGCCTGGTCCACCAGAAGTTCTGGAGAAGTACGTGTTGATTGCTGTCTTGTGTTCTCATCCACAGCTATATGCTAGACCAACAATGGATCAGGTTGTTAAAATGCTGGAGACAGATGAATCGGTTCCCTCCTTAATGGAAAGGCCAATTCCTTTTATAGCTGGGAGGATTGACATTGAGAAATCTGCGCTGAGTAACTCGGGTCAGCTCTGCAGTCCAACCGGTTATCAAGCATATACATTACAAGGTCGCCGCAGATCTATTTCTAAAGAAGAGGAGGAAGAAGAAGAAGAAGGAAGTTCAGTGGCTGATACTGCTACCACAGAATGA 1923 0.4914 MSLPFFFSLFFIFSFSFILPLPSLAANDTVPCPLNITVLRVVGGGARPSFDSGTQCHYILQALHLLQADYLRRSNLFVPPLNASESCWTSFQSFINEFDPNIDIRSSCGLKTEWISQGCMNITTKQKFEATVPSAAIQAVQGNCNQSLENNAPCALCTTKLSNLLSYLTGPTVGNVTDCRAYTSIYAASLSDQYGATDPGTAKCLFGLDFSSSSSSSKRRTIVIVVSVFCFVALLVFAGVWTYLRFKRRNEFAGEKGVGTSELGLGSGLDSMNQSTTLIRFSFDDIKKATRNFSRDNMIGSGGYGNVYKGMLQDGSPVAFKRFKNCSVAGDASFTHEVEVIASVRHVNLVTLRGYCTATTNLEGHQRIIVTDLMENGSLYDHLFGSSKKNLSWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDHKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGKKALQTNDDGQPSALTDLAWSLVRNGSALDVVEDGIPEPGPPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMLETDESVPSLMERPIPFIAGRIDIEKSALSNSGQLCSPTGYQAYTLQGRRRSISKEEEEEEEEGSSVADTATTE 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01690 640 CDD STKc_IRAK 299 568 - -
Phco2g01690 640 SUPERFAMILY Protein kinase-like (PK-like) 275 580 IPR011009 -
Phco2g01690 640 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Phco2g01690 640 Pfam Protein kinase domain 294 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01690 640 Gene3D Transferase(Phosphotransferase) domain 1 374 577 - -
Phco2g01690 640 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 138 618 - -
Phco2g01690 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Phco2g01690 640 ProSiteProfiles Protein kinase domain profile. 293 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01690 640 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 256 372 - -
Phco2g01690 640 MobiDBLite consensus disorder prediction 612 640 - -
Phco2g01690 640 Gene3D Phosphorylase Kinase; domain 1 267 372 - -
Phco2g01690 640 Pfam SPARK 28 179 IPR043891 -
Phco2g01690 640 SMART serkin_6 293 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01690 640 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 374 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01690 Phco-Chr2 47269934 47271856 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Phco2g01690 Pkinase 7.3e-43 CL0016