Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01689 ATGGAGGACGAAGTGGATTCCCCTGTTGGTGTTCTTGAGGATTATTTTTTCAAGAGTTCAGAATCAGAAAGTAGTTCTTCCAAAGAACCTGGTACTACTACGGATTCTGATAAGTCAAAGCCCGGTTCTAGGTGGCATGCGTTTCTTCAATTGTTGAGGGTCAAATCAAAGAAGCCAATAGCCACATTGTATCCTCTCAGTGTCCTCAAGCTCTCCAGAAGATTGAGCAGTGGCATGAGGGAGACTGTCATAGATGCAGATTCGTCCTTGCATAGGTCACCCTGGGAGATCTTCACTCACCATGAGATACAAATTGCAACCAATCACTTCGCCCAAGAAAATTGTATAGGAAAAGGTGGTTATGCTGAGGTTTACAAAGGGTGTTTACCAAATGGTCAGCTGGTGGCGATTAAACGATTGACACGTGGAGAAGAAAATCAAACTATAGGGGACTTCTTATCAGAACTTGGCATAATGGCTCATGTAAACCATCCCAATACTGCTAAGTTAGTTGGCTATGGAGTGGAGGGAGGAATGCATTTAGTGCTCGAGTTGTCTAAAAAAGGGTGCTTAGCTTCAGTGCTGAATGGTTCCAAGGAGAAGCTACCATGGTCTGTTAGGCAGAAAATAGCATTAGGAACAGCCAAGGGTGTATTGTATCTTCATGAAGGTTGTCAAAGAAGAATTATACACAGAGATATAAAAGCATCAAATATCTTGCTTACCGAGGACTTTGAGCCGCAGATTTGTGATTTCGGGCTAGCAAAATGGCTACCAGAGAATTGGACCCATCACACCGTTTCAAAAATTGAAGGGACTTTTGGTTACCTTGCTCCAGAATACTTGCTTCATGGGATAGTGGATGAGAAAACAGATGTTTTTGCCTTTGGTGTAGTGCTATTAGAATTAGTCACTGGGCGTAGAGCAATTGATTATTCACAACAAAGCCTTGTTTTGTGGGCAGAACCTTTTCTGAAAAAGAATAATATTAGGGAGCTGATTGATCCTTCACTTGCTGCCGATTTTGACTGTCGGCAGATTAAAATTATGCTCTTGACAGCTTCTTTATGCATTCAACAATCCTCCATTCGTCGCCCCTCTATGAACCAGGTTGTACAGCTTCTGAATGGTAACTGCTCTAGGTTCACGAAGAAATCCCAACTTCCATTCTTTCGTAAAGACTTTCAGGAAGAGTTCATTGATTCTGATTAA 1212 0.42 MEDEVDSPVGVLEDYFFKSSESESSSSKEPGTTTDSDKSKPGSRWHAFLQLLRVKSKKPIATLYPLSVLKLSRRLSSGMRETVIDADSSLHRSPWEIFTHHEIQIATNHFAQENCIGKGGYAEVYKGCLPNGQLVAIKRLTRGEENQTIGDFLSELGIMAHVNHPNTAKLVGYGVEGGMHLVLELSKKGCLASVLNGSKEKLPWSVRQKIALGTAKGVLYLHEGCQRRIIHRDIKASNILLTEDFEPQICDFGLAKWLPENWTHHTVSKIEGTFGYLAPEYLLHGIVDEKTDVFAFGVVLLELVTGRRAIDYSQQSLVLWAEPFLKKNNIRELIDPSLAADFDCRQIKIMLLTASLCIQQSSIRRPSMNQVVQLLNGNCSRFTKKSQLPFFRKDFQEEFIDSD 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01689 403 SMART serkin_6 110 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01689 403 SUPERFAMILY Protein kinase-like (PK-like) 90 375 IPR011009 -
Phco2g01689 403 MobiDBLite consensus disorder prediction 18 32 - -
Phco2g01689 403 ProSiteProfiles Protein kinase domain profile. 110 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01689 403 MobiDBLite consensus disorder prediction 16 42 - -
Phco2g01689 403 ProSitePatterns Protein kinases ATP-binding region signature. 116 138 IPR017441 GO:0005524
Phco2g01689 403 Gene3D Phosphorylase Kinase; domain 1 81 184 - -
Phco2g01689 403 Pfam Protein kinase domain 112 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01689 403 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 80 184 - -
Phco2g01689 403 PANTHER OS08G0249100 PROTEIN 6 398 IPR046958 -
Phco2g01689 403 Gene3D Transferase(Phosphotransferase) domain 1 187 392 - -
Phco2g01689 403 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 187 388 - -
Phco2g01689 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01689 Phco-Chr2 47251561 47253813 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phco2g01689 Pkinase 3e-41 CL0016