Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01658 ATGTTGTGCTGCGGAGGTGCAGAGGAGGAGAGCAGCGGCCCCCCTGCAAGCCAATACACATCTGCACCACCTAGGGGTAGCACATACGGTGGAGGAGGAAACGATAGAGGAGAGCCTAGGGGTATTGCAAAGAGTGCCCCACAGAAAGTGTTGCCAATTGAGATACCCTCTATTCCATTGGATGAGTTAAATAGGTTAACAGGAAACTTTGGTACAAAGGCTTTCATCGGCGAAGGTTCCTACGGACGGGTTTACTATGCAAAATTGAGTGATGGTACTGATGCTGCAATTAAGAAGCTGGATAACAGTTCTTCCCCAGAACCTGACTCCGATTTCGGGACTCAGTTATCAGTTGTTTCAAGACTGAAGCATGACAACTTTGTTGAGTTGATTGGATATTGTCTAGAGGCAGAAAACAGAATTTTGGTTTACCAACATGCAGGCCTTGGTTCTTTGCATGACGTGTTACATGGAAGGAAGGGGGTACAAGGGGCTGAACCTGGTCCAGTTTTAAGCTGGAACCAGAGAGCCAAAATTGCATTTGGTGCTGCAAAAGGACTTGAGTTTCTTCACGAAAAGGTGCAGCCTTCTATTGTTCATCGCGATGTTAGATCCAGCAATGTCTTACTGTTCAATGACTATGAGGCCAAGATAGCCGATTTTAGCTTGACAAATCAGTCTTCAGACACAGCCGCTCGGCTACATTCAACAAGAGTCTTGGGAACATTTGGCTATCATGCTCCAGAGTATGCCATGACAGGGCAGATAACCCAGAAAAGTGATGTTTACAGTTTTGGTGTTGTGCTATTAGAACTCTTGACTGGAAGAAAGCCAGTAGATCACACAATGCCGAAAGGACAACAAAGTCTTGTAACTTGGGCAACTCCAAGGCTGAGCGAGGACAAAGTGAAACAGTGTGTTGATCCTAAGCTAAACAATGAGTATCCACCAAAAGCTATTGCCAAGTTGGCAGCTGTGGCAGCACTTTGTGTTCAGTATGAAGCTGACTTCAGACCAAACATGACGATTGTTGTCAAAGCTCTCCAGCCACTTCTCAATGCAAAACCCCCTGGTCCTGAAACTCATGCTTGA 1092 0.4588 MLCCGGAEEESSGPPASQYTSAPPRGSTYGGGGNDRGEPRGIAKSAPQKVLPIEIPSIPLDELNRLTGNFGTKAFIGEGSYGRVYYAKLSDGTDAAIKKLDNSSSPEPDSDFGTQLSVVSRLKHDNFVELIGYCLEAENRILVYQHAGLGSLHDVLHGRKGVQGAEPGPVLSWNQRAKIAFGAAKGLEFLHEKVQPSIVHRDVRSSNVLLFNDYEAKIADFSLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPPGPETHA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01658 363 ProSiteProfiles Protein kinase domain profile. 70 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01658 363 FunFam probable protein kinase At2g41970 43 146 - -
Phco2g01658 363 Gene3D Phosphorylase Kinase; domain 1 43 146 - -
Phco2g01658 363 Gene3D Transferase(Phosphotransferase) domain 1 149 357 - -
Phco2g01658 363 FunFam PTI1-like tyrosine-protein kinase 3 148 357 - -
Phco2g01658 363 SMART tyrkin_6 70 348 IPR020635 GO:0004713|GO:0006468
Phco2g01658 363 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 356 - -
Phco2g01658 363 MobiDBLite consensus disorder prediction 1 46 - -
Phco2g01658 363 ProSitePatterns Tyrosine protein kinases specific active-site signature. 198 210 IPR008266 GO:0004672|GO:0006468
Phco2g01658 363 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Phco2g01658 363 SUPERFAMILY Protein kinase-like (PK-like) 47 348 IPR011009 -
Phco2g01658 363 MobiDBLite consensus disorder prediction 13 27 - -
Phco2g01658 363 Pfam Protein tyrosine and serine/threonine kinase 74 348 IPR001245 GO:0004672|GO:0006468
Phco2g01658 363 PIRSF ILK 34 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01658 Phco-Chr2 46863165 46865358 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Phco2g01658 PK_Tyr_Ser-Thr 4.2e-45 CL0016