Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01585 ATGCCAATGCATCATCTTCTTATATCACTCCTTCTCTTCTTCGTCCTTCCTCCAACCACCTCTCTCAACTCAGACGGCCTCTCCCTCCTCGCCCTCAAAGCCGCCGTCGACTCCGATCCCGCCGCCGTCCTTAGCTCCTGGTCGGAAAACGACGCCACTGCATGCCACTGGCCAGGCGTGTCCTGCACCGGCGACAGAGTTTCCCAACTCTCTCTCCCTGACAAGAACCTCAGCGGTTACATTCCCTCCGAACTGGGATTTCTCACCTCCCTCAAAAGACTGAGTCTTCCACACAACAACTTCTCCAACGCCATTCCTCCCTCTCTCTTCAACGCCACCACCCTCATTGTCCTCGACCTCTCTCACAACTCGCTCTGTGGTTCCCTTCCCTCACACTTTCTCTCCCTCAAGTTCCTTCGCCATTTGGACCTCTCCTCCAACTATCTCAACGGTTCCCTCCCTCCTACCCTCTCCGATCTCACTTCTCTCACCGGAACTCTCAATCTCTCTTTCAACCTCTTTTCCGGCGGGATTCCGGCCACCCTTTCTAACCTGCCTGTGGCTGTGAGCCTCGACCTCCGCAACAACAACCTCACCGGAAAAATCCCCCAGGTTGGGTCCCTGCTAAATCAGGGCCCCACCGCGTTTTCTGGGAACCCTGGACTCTGTGGCTTCCCCTTGCAAACCGCGTGTCCCGAAGCGCAAAAGCCTGGGATTTTCGCCAACCCTGAAGAGGGTTTCCCTCAGAACCCCAATGCGCTTCACCCCGAAGGCTCAGACCAGAGACTGAAACCGCACGGTGGTGGCTCCGTCGCGGTTCTTGTCATCTCCGGGCTTTCCGTCGCGGTTGGAGCGGTTTCTCTCTCGCTGTGGGTTTTCCGGCGACGGTGGGGCAGCGGCGAGGAGGGGAAATTGGGGGGGCAGAAGTTGGAGAGTGAGGTGGATTTGGGGGAGGGTCAAGATGGTAAATTTGTTGTGGTGGATGAAGGGTTTGAGTTGGAGTTGGAGGATTTGCTTAGGGCGTCTGCGTATGTTGTTGGGAAGAGTAGGAGTGGGATTGTGTACAAGGTTGTCGGGGTCGGAAGAGGGTCTTCCTTGGCGGCGAATGCGGTGGCTGTTCGGCGACTCAGTGAGGGTGATGCCACGTGGCGATTTAAGGAGTTTGAGTCTGAAGTGGAGGCCATAGCAAGGGTTCGTCACCCCAATGTTGTTCCGTTGAGAGCTTATTATTATGCGCATGATGAGAAGCTGCTTATCACCGATTTCATTCGCAATGGAAGCTTGCACACTGCTTTACACGGTGGGCCTTCCAATTCATTGCCACCATTATCATGGGCAGCACGGTTAAAAATTGCTCAAGAAGCAGCCAAGGGCTTGATGTATATACACGAGTTCAGTGGTCGCAAATATATCCACGGCAACATTAAGTCAGCAAAAATCTTACTAGACGATGAGCTCCATGCATACGTGTCAGGTTTTGGACTTTCTCGGCTTGGTTTGGGCCCGCCAAAGTCTACTACAATGGCTCCAAAACGGAACAGCTTGAACCAATCTTCTATAACCACTGCAATGAGTTCAAAGGTTGCAACTTCCTTTTACCACTACCTGGCACCTGAGGTGCGCATGGCTGGTGGCAAGTTCACTCAGAAATGTGATGTGTATTCATTTGGCATTGTCCTGTTGGAACTTTTGACGGGTAGGATGCCAGATTTTGGAGCAGAAAATGATGACAAGGTGCTGGAGAGTTTTGTGAGGAAAGCGTTCAAGGAGGAGCAGCCACTGTCTGATATCATTGACCAAGCACTCATCCCTGAAGTTCATGCTAAAAAGCAAGTCATTGCTGCATTCCATATTGCTCTGAACTGCACTGAACTGGATCCAGAGTTGCGACCAAGAATGAAAACCGTGTCAGAGAGCCTTGATAACATCAAATACAGTGAAAAACAAGAAAACCATGTATAG 1962 0.5209 MPMHHLLISLLLFFVLPPTTSLNSDGLSLLALKAAVDSDPAAVLSSWSENDATACHWPGVSCTGDRVSQLSLPDKNLSGYIPSELGFLTSLKRLSLPHNNFSNAIPPSLFNATTLIVLDLSHNSLCGSLPSHFLSLKFLRHLDLSSNYLNGSLPPTLSDLTSLTGTLNLSFNLFSGGIPATLSNLPVAVSLDLRNNNLTGKIPQVGSLLNQGPTAFSGNPGLCGFPLQTACPEAQKPGIFANPEEGFPQNPNALHPEGSDQRLKPHGGGSVAVLVISGLSVAVGAVSLSLWVFRRRWGSGEEGKLGGQKLESEVDLGEGQDGKFVVVDEGFELELEDLLRASAYVVGKSRSGIVYKVVGVGRGSSLAANAVAVRRLSEGDATWRFKEFESEVEAIARVRHPNVVPLRAYYYAHDEKLLITDFIRNGSLHTALHGGPSNSLPPLSWAARLKIAQEAAKGLMYIHEFSGRKYIHGNIKSAKILLDDELHAYVSGFGLSRLGLGPPKSTTMAPKRNSLNQSSITTAMSSKVATSFYHYLAPEVRMAGGKFTQKCDVYSFGIVLLELLTGRMPDFGAENDDKVLESFVRKAFKEEQPLSDIIDQALIPEVHAKKQVIAAFHIALNCTELDPELRPRMKTVSESLDNIKYSEKQENHV 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01585 653 Gene3D Transferase(Phosphotransferase) domain 1 423 653 - -
Phco2g01585 653 FunFam Leucine-rich repeat receptor-like protein kinase 140 233 - -
Phco2g01585 653 Gene3D Ribonuclease Inhibitor 27 136 IPR032675 -
Phco2g01585 653 FunFam Leucine-rich repeat receptor-like kinase 27 139 - -
Phco2g01585 653 Gene3D Ribonuclease Inhibitor 137 233 IPR032675 -
Phco2g01585 653 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Phco2g01585 653 SUPERFAMILY Protein kinase-like (PK-like) 345 645 IPR011009 -
Phco2g01585 653 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 646 IPR046959 -
Phco2g01585 653 Pfam Protein tyrosine and serine/threonine kinase 346 640 IPR001245 GO:0004672|GO:0006468
Phco2g01585 653 Pfam Leucine rich repeat 90 149 IPR001611 GO:0005515
Phco2g01585 653 SUPERFAMILY L domain-like 25 228 - -
Phco2g01585 653 Gene3D Phosphorylase Kinase; domain 1 325 422 - -
Phco2g01585 653 ProSiteProfiles Protein kinase domain profile. 340 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01585 653 MobiDBLite consensus disorder prediction 243 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01585 Phco-Chr2 46170160 46173470 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phco2g01585 PK_Tyr_Ser-Thr 3.5e-28 CL0016