Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01554 ATGGGTATCTGCTGCGCGAAGCCGTCCACGCAGGAGGAGAGCAAGAAGGGAAAAAAGGGGAAAAAGGAGAACCCCTTCGCTATCGATTACGGGTTTAACAACAGCGCCAACGCCAACGGCTCCAAGCTCACCGTTTTGAAGTCTCCCACAGGCCGTGAGATCGAGGCCCGTTACGAGCTGGGCCGCGAGCTCGGCCGGGGCGAGTTCGGCGTCACGTACCTCTGCACGGACAAGGAGAGCGGCGAGGAACTTGCCTGCAAGTCCATTTCCAAGAAGAAGCTGAGGACCGCCATCGACATCGAGGATGTCAGGAGAGAGGTTGAGATCATGCGCCACTTGCCGCAGCATCCCAACATCGTCACCTTAAAGGACACCTATGAGGACGACAATGCCGTTCATCTCGTTATGGAGCTTTGCGAAGGCGGAGAACTCTTTGATCGCATCGTCGCGCGTGGCCACTACACCGAACGCGCCGCCGCTGCCGTCACCAAAACTATCGTCGAAGTCGTTCAGATGTGCCACAAGCATGGCGTGATGCATCGGGATCTTAAGCCGGAAAACTTTTTATTTGCAAATAAGAAGGAAACTGCAGCTCTGAAGACTATAGATTTTGGATTGTCAGTGTTCTTTAAACCAGGGGAAAGATTTAATGAGATAGTTGGAAGTCCGTATTACATGGCTCCTGAGGTATTGAAGCGGAATTATGGGCCAGAAGTAGATATCTGGAGTGCTGGAGTAATTCTATACATCTTACTTTGTGGTGTTCCACCATTTTGGGCAGAAACTGAGCAAGGAGTTGCACAAGCAATCATACGATCTGTTGTTGATTTCAAAAGGGACCCATGGCCTAAAGTTTCTGATAATGCGAAAGACCTTGTGAGGAAGATGCTAGATCCTGATCCAAGGCGGCGGCTAACTGCACAGGATGTGTTAGATCATCCGTGGTTACAAAATGCAAAGAAAGCTCCTAATGTTTCTTTAGGCGAAACTGTTAGAGCAAGGCTTAAGCAATTTTCTGTAATGAACAAGCTTAAGAAAAGGGCTTTAAGGGTGATCGCAGAGCATTTGACAATAGAAGAAGCTGCTGGCCTTAAAGAGGGATTCAAGCTTATGGATACAAACAACAGAGGCAAGATTAACATTGATGAACTACGAGTAGGGTTGCATAAATTAGGCCATCAAGTTCCTGATTCAGATGTCCAAATTCTTATGGAAGCTGGTGATGTAGACAAGGATGGACACCTAGATTATGGAGAGTTTGTAGCTATCTCTGTTCATCTGAGAAAGATGGGAAATGATGAGCATCTTCGTAAAGCCTTCCAATTTTTTGATGAAAACCAAAATGGGTATATTGAGATTGAAGAACTGCGTAACGCGTTATCTGATGAGGTTGAAACAAACAGTGAAGAAGTTATCAATGCAATTATGCATGATGTAGACACAGACAAGGATGGAAGGATAAGTTACGATGAATTTGCTACAATGATGAAGGCTGGGACAGATTGGAGGAAAGCATCAAGGCAGTACTCGCGAGAGAGGTTTGCGAGTCTGAGCCTGACTTTGATGAGGGACGGGTCATTGCATTTAAACAATGAAAAAAATGAGGGTAGATGA 1614 0.4641 MGICCAKPSTQEESKKGKKGKKENPFAIDYGFNNSANANGSKLTVLKSPTGREIEARYELGRELGRGEFGVTYLCTDKESGEELACKSISKKKLRTAIDIEDVRREVEIMRHLPQHPNIVTLKDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTKTIVEVVQMCHKHGVMHRDLKPENFLFANKKETAALKTIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVVDFKRDPWPKVSDNAKDLVRKMLDPDPRRRLTAQDVLDHPWLQNAKKAPNVSLGETVRARLKQFSVMNKLKKRALRVIAEHLTIEEAAGLKEGFKLMDTNNRGKINIDELRVGLHKLGHQVPDSDVQILMEAGDVDKDGHLDYGEFVAISVHLRKMGNDEHLRKAFQFFDENQNGYIEIEELRNALSDEVETNSEEVINAIMHDVDTDKDGRISYDEFATMMKAGTDWRKASRQYSRERFASLSLTLMRDGSLHLNNEKNEGR 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01554 537 ProSitePatterns EF-hand calcium-binding domain. 444 456 IPR018247 -
Phco2g01554 537 SUPERFAMILY Protein kinase-like (PK-like) 57 324 IPR011009 -
Phco2g01554 537 Gene3D Transferase(Phosphotransferase) domain 1 144 324 - -
Phco2g01554 537 ProSiteProfiles EF-hand calcium-binding domain profile. 359 394 IPR002048 GO:0005509
Phco2g01554 537 PANTHER SERINE/THREONINE-PROTEIN KINASE 51 492 - -
Phco2g01554 537 CDD EFh 435 497 IPR002048 GO:0005509
Phco2g01554 537 FunFam calcium-dependent protein kinase 13 144 324 - -
Phco2g01554 537 Pfam EF-hand domain pair 434 497 IPR002048 GO:0005509
Phco2g01554 537 Pfam EF-hand domain pair 364 423 IPR002048 GO:0005509
Phco2g01554 537 Gene3D Phosphorylase Kinase; domain 1 60 143 - -
Phco2g01554 537 ProSiteProfiles EF-hand calcium-binding domain profile. 431 466 IPR002048 GO:0005509
Phco2g01554 537 ProSiteProfiles EF-hand calcium-binding domain profile. 467 502 IPR002048 GO:0005509
Phco2g01554 537 SUPERFAMILY EF-hand 345 522 IPR011992 -
Phco2g01554 537 ProSiteProfiles Protein kinase domain profile. 58 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01554 537 FunFam Calcium-dependent protein kinase 1 60 143 - -
Phco2g01554 537 ProSitePatterns EF-hand calcium-binding domain. 480 492 IPR018247 -
Phco2g01554 537 FunFam Calcium-dependent protein kinase 7 325 500 - -
Phco2g01554 537 Pfam Protein kinase domain 58 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01554 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Phco2g01554 537 MobiDBLite consensus disorder prediction 1 22 - -
Phco2g01554 537 ProSitePatterns EF-hand calcium-binding domain. 408 420 IPR018247 -
Phco2g01554 537 Gene3D - 325 499 - -
Phco2g01554 537 SMART efh_1 363 391 IPR002048 GO:0005509
Phco2g01554 537 SMART efh_1 471 499 IPR002048 GO:0005509
Phco2g01554 537 SMART efh_1 399 427 IPR002048 GO:0005509
Phco2g01554 537 SMART efh_1 435 463 IPR002048 GO:0005509
Phco2g01554 537 ProSitePatterns Protein kinases ATP-binding region signature. 64 87 IPR017441 GO:0005524
Phco2g01554 537 ProSiteProfiles EF-hand calcium-binding domain profile. 395 430 IPR002048 GO:0005509
Phco2g01554 537 SMART serkin_6 58 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01554 537 CDD STKc_CAMK 57 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01554 Phco-Chr2 45741962 45745696 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phco2g01554 Pkinase 2.7e-77 CL0016