Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phco2g01549 | ATGGGGACTCCAGAATTCCCAAATCTCGGCAAGCATTGTTCTGTTTCCGATTGCAGACAGCTTGATTTCTTGCCCTTCACATGCGATCGCTGTAATCAGATATATTGTTTGGAACACAGAAGTTATATTGAACACAAATGTACAAAACCCAACAAAGAAGATGTCACAGTTGTCATATGTCCTCTTTGTGCCAAAGGAGTTCGCCTCATTCCAGATCAAGATCCCAACATAACTTGGGACCATCATGTTAACATTGATTGTGACCCATCAAATTACGAAAAAGTGACAAAGAAGAGAAAATGCCCTGCCCCTGGATGCCGAGAGGTATTGGTATTCTCCAACACAATCAAATGCAGGGATTGTTTGGAAGACCATTGTTTGAAGCACCGGTTTGGTTCTGATCACAAATGTTCCGGTCCCAAAAAGTTGGAGACAAGTTTTTCATTCATGGGTTTTTTTAATACGACTAAACAAGAGGAGCCAAAGCCCAATTTAACTTCAACCGCATCATCTAACTGGACTTCAAGCTTTCTCAACGTGGCTTCTAATATTCGTGCCTCAGCTGAAGCGAGCATGTCAAAATTGAGCAATGAAATTAACCAAGTTTGGCTGTCAGCTAGAGATGGTGTGGGACAAAGAAATGGCAGTGGAAATAGAAATGATGATCAAGGGGAGCATTGCCGTCAATGTGGTGTAAAGTTTTCCTCTGCGACTTCTTTGGTGGATCATGTGCAAAAAGTTCATGGAAGCAATGAGAAACGATTAGGAGTTAAGAAGATTGATGCATGCCCCAAGTGTAGTAGAGGGTTTGTAGATCCAGTGTCCCTTGCGGAGCACGTTGAGAGGGATCATGGTGGTGGTTGTGGAGCGTAG | 873 | 0.4296 | MGTPEFPNLGKHCSVSDCRQLDFLPFTCDRCNQIYCLEHRSYIEHKCTKPNKEDVTVVICPLCAKGVRLIPDQDPNITWDHHVNIDCDPSNYEKVTKKRKCPAPGCREVLVFSNTIKCRDCLEDHCLKHRFGSDHKCSGPKKLETSFSFMGFFNTTKQEEPKPNLTSTASSNWTSSFLNVASNIRASAEASMSKLSNEINQVWLSARDGVGQRNGSGNRNDDQGEHCRQCGVKFSSATSLVDHVQKVHGSNEKRLGVKKIDACPKCSRGFVDPVSLAEHVERDHGGGCGA | 290 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phco2g01549 | 290 | SUPERFAMILY | AN1-like Zinc finger | 93 | 143 | IPR035896 | - | |
Phco2g01549 | 290 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 227 | 248 | IPR013087 | - | |
Phco2g01549 | 290 | SMART | c2h2final6 | 261 | 284 | IPR013087 | - | |
Phco2g01549 | 290 | SMART | c2h2final6 | 225 | 248 | IPR013087 | - | |
Phco2g01549 | 290 | PANTHER | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED | 5 | 251 | - | - | |
Phco2g01549 | 290 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 225 | 253 | IPR013087 | - | |
Phco2g01549 | 290 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 263 | 284 | IPR013087 | - | |
Phco2g01549 | 290 | Gene3D | - | 2 | 58 | IPR035896 | - | |
Phco2g01549 | 290 | Gene3D | - | 87 | 166 | IPR035896 | - | |
Phco2g01549 | 290 | SMART | AN1_Zf_4 | 101 | 142 | IPR000058 | GO:0008270 | |
Phco2g01549 | 290 | SMART | AN1_Zf_4 | 13 | 52 | IPR000058 | GO:0008270 | |
Phco2g01549 | 290 | ProSiteProfiles | Zinc finger AN1-type profile. | 7 | 55 | IPR000058 | GO:0008270 | |
Phco2g01549 | 290 | FunFam | AN1-type zinc finger protein 2B isoform X1 | 3 | 64 | - | - | |
Phco2g01549 | 290 | Gene3D | Classic Zinc Finger | 188 | 286 | - | - | |
Phco2g01549 | 290 | SUPERFAMILY | AN1-like Zinc finger | 6 | 52 | IPR035896 | - | |
Phco2g01549 | 290 | Pfam | zinc-finger C2H2-type | 226 | 248 | IPR041697 | - | |
Phco2g01549 | 290 | Pfam | AN1-like Zinc finger | 13 | 51 | IPR000058 | GO:0008270 | |
Phco2g01549 | 290 | Pfam | AN1-like Zinc finger | 101 | 141 | IPR000058 | GO:0008270 | |
Phco2g01549 | 290 | ProSiteProfiles | Zinc finger AN1-type profile. | 95 | 145 | IPR000058 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phco2g01549 | Phco-Chr2 | 45681443 | 45682915 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Phco2g01549 | zf-AN1 | 9.1e-08 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phco2g01549 | 2 | 45681443 | 45682915 | Phco2g01549 | 2 | 45681443 | 45682915 | ECH | |
Phco2g01549 | 2 | 45681443 | 45682915 | Phco6g00287 | 6 | 2819264 | 2822426 | PCT |