Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01521 ATGGCGGTGACTTCATCATTCTCACGTCGCTTCTTCATAAAACCGTTTCCCCTTTTCTCCTTCAATTTCTCATTCTCCACCGCTTCGTCGTTGCCGCCTCCGATCCGAGTCGCGCTTACCGACTCTGTGGGCCGCGCCGTCTTCGCCACGCGCCACATCGCCGCCGCCGACCTCATCCACACCGCCAGCCCCGCCGTTTGCCACCCCTACTCCGCCCGAGCCGCCTGCTACTCCTGTCTCGCCGCGCTCCCACACTCCCAACCTCTCCGCGCGCACTTTTGCAGCCAACACTGCCACCAACGATCCAAGGGATATTACGATGTTGAGATCAAAGCAAATTGGGTGGCTTTTGATGACTATTGTGGGACTCGTGGTTTGAAGTATCCCTTTCTGGTAAAGCGATTGGCTTGCATGGTCATAGCAGGAGATGCCAGAAGTGACACTCTTGACATACTCCAGCCTGCCAATTTTACGCCTGAGATGGTATCAGAGATGGAAGAGGAGTTTGTCTTGCTAAGGAATGCCTTCACGAAGACACTTATTGGAGATGATCATATTGCTTTTTTAACCAAGCAATGGTACATTAACGTTTTGGCTCGAATTCGAATCAACGCATTTCGCATCGAGTTGGCCGTGGGACTGTATGAAGATCTTCTTTCATTAGCTGTTGCATCTGTGGAAGCTGAGGCTGCTGTTGGAAATGCTGTCTATATACTTCCCTCCTTCTACAATCATGATTGTGATCCTAACGCACACATCATATGGATAGATAACGCTCATGCAAAATTGAAGGCACTCCGTGACATTGATGAAGAAAAAACTGTGCTCATGGGGTTTTTCTGA 843 0.5006 MAVTSSFSRRFFIKPFPLFSFNFSFSTASSLPPPIRVALTDSVGRAVFATRHIAAADLIHTASPAVCHPYSARAACYSCLAALPHSQPLRAHFCSQHCHQRSKGYYDVEIKANWVAFDDYCGTRGLKYPFLVKRLACMVIAGDARSDTLDILQPANFTPEMVSEMEEEFVLLRNAFTKTLIGDDHIAFLTKQWYINVLARIRINAFRIELAVGLYEDLLSLAVASVEAEAAVGNAVYILPSFYNHDCDPNAHIIWIDNAHAKLKALRDIDEEKTVLMGFF 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01521 280 SUPERFAMILY SET domain 31 272 IPR046341 -
Phco2g01521 280 Pfam SET domain 44 270 IPR001214 GO:0005515
Phco2g01521 280 Gene3D - 75 123 - -
Phco2g01521 280 Gene3D - 124 205 - -
Phco2g01521 280 ProSiteProfiles SET domain profile. 33 280 IPR001214 GO:0005515
Phco2g01521 280 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 32 271 - -
Phco2g01521 280 Gene3D SET domain 46 277 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01521 Phco-Chr2 45197885 45212572 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phco2g01521 SET 5.4e-08 No_clan