Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01519 ATGGCCAGCACCGGAACACAGTGTCTCCAACTCGCCGGTGCCGCGTCGACTCACCAGAGAACCTCCATTTCGTGCCATAAGAAAACGGATAAGATTGCATTCAAGGAAACGAAAGAAGGCTTCGTGGACTACGACCGAGGCCTGCACGAGGTCTCTACCAAAATATCCGGCCTCCGCAAGGACAATATCGCTACCCACTACCGCCTCCGGGTCGCCGGTAACCGCTTTCAGAAGGACTGGACGGTTTCTGAGGTAGCCAACCTTGTCCTCTCGCTCGACCTCTCCGATGACATCGACGGCCTACTCAACCGTTGGATAGGCCGCTTCGCACGCAAGAACTTCCCCTACCTTATTAAGGAGTTGACGCAGCGAGGGTCCATTGAACACTGTAATCGCGTATTCAGGTGGATGAAGTACCAGAGAAACTACTGTGCGCGCAATGATATATACAACATGATGATTAGGTTGCACGCTCGCCACAATCGAACGGACCATGCGCGTGGATTGTTTTTCGAGATGCAGGAATGGAGGTGTAAACCGGATGTTGAGACTTACAATGCTCTTATCAACGCACATGGTCGAGCTGGACAGTGGCGTTGGGCTTTGAATATCATGGATGACATGCTGCGTGCAGCTATTCCACCGAGTAGGTATACCTATAACAACTTGATAAATGCTTGTGGATCTAGTGGGAATTGGAAAGAAGCACTCAACGTTTGCAAGAAAATGACAGAACACGGTGTTGGGCCTGATCTTGTTACTCACAATATTATTCTATCTGCATTTAAAAGTGGTGCTCAGTATTTGAAAGCTCTGTCATATTTTGAACTAATGAAGGGAACTCATATTCGTCCTGACACAACTACACTTAATATTATTATCCATTGTCTAGTAAAGCTTCAACAATACGACAAAGCTATTGATATTTTTAATTCCATGAGGGAGAAGAAATCAGAATGTACCCCTGATGTTGTTACATTCACAAGTATCATTCACTTGTATTCTGTGTGTGGACAAGTTGATAATTGTGAGGCTGCATTCAATATGATGCTTGCAGAAGGGCTGAAACCTAATATAGTCTCATATAATGCACTAATAGGTGCTTATGCTGCTTGTGGGATGGACAATGAGGCACTTTTGGTTTTCAATGAGATAAAAGGAAATGGTTTCCGGCCTGATGTTGTATCTTATACGTCTCTCCTTAATGCTTATGGAAGGTCACAAAAACCCCAAAAAGCAAGGGAAATATTTGATATGATGAAGACAAACAAGTTGAAGCCAAACCTTGTCAGTTACAATTCACTGATTGATGCCTATGGATCTAGTGGTTTTCTGACAGATGCAATTGAAGTCTTGCGAGAAATGGAACAAGATGGAATTCAACCAAATGTTGTTTCAATATGCACACTCTTAGCTGCCTGTGGACGATGCAGTCGGAAGGTGAAGATTGACACAGTACTAACAGCAGCTAAGATGCGAGGAATTAAGTTAAACACAGTTGCTTATAATTCAGCTATAGGGAGCTATATGAATGTAGGGGAATATGAAAAAGCTATAAACTTGTATAAATCTATGAGGAAGAAAAAAATTAAAACTAATTCTGTTACTTACACTGTGTTGATAAGTGGTTGTTGTAAGATGTCAAAATATTGTGAAGCCCTTTCTTTTACGAAAGAAATGATGCATCTAAAACTTCCTTTGACCAAAGAGCTCTACTCTTCTGTCATATGTGCCTATAGCAAACAGGGTCAAATTGAAGAAGCAGAATCTACATTTAACTTGATGAAATCATCTGGTTGTTACCCTGATGTGGTTACATACACCTCCATGCTTGATGCCTACAGTGCAGCTGGCAATTGGGAGAAAGCATATGCACTCTTTGAAGAAATGGAAGCAACTGGCATCAAGCTGGATACCATTGCCTGTGCAGCTCTGATGAGATCTTTTAATAAAGGTGGTCAGCCGGGAAGGGTTCTTAATCTTGCACAAAGCATGAGAGAAAAAGAAATTCCTTTCACTGATACCATATTTTTTGAAATGGTATCAGCCTGTAGCATATTACAAGATTGGAGGACAGCTGTTGATTTGATCAAGTACATAGAGCCCTCACTTCCTGTAATTTCATCTGGGTGTTTGAATCAGTTCCTGCATTCTTTAGGAAAAAGTGGAAAGATTGAAACTATGTTGAAGTTATTCTTCAAAATGTTGGCATCAGGTATTGATGTTAACTTAAACACTTACTCTATTTTATTGAAGAACCTTTTATCATCTGGAAATTGGAGGAAGTATTTAGAGGTATTGCAATGGATGGAGGATGCAGGAATTCATCCATCAAATGAAATGTACCACGATATATCTGCTTTTTCTCAAAAATGCTGTGGGCACGAAAATGCTGCTGTTATAAAAGAAAGACTTGAATCCTTGAAAAGAAAATCTGAGGATCAAATTTCTGCCAGCCGACCAGGTGAAACTCCTGTTCTTAGTTGA 2487 0.4125 MASTGTQCLQLAGAASTHQRTSISCHKKTDKIAFKETKEGFVDYDRGLHEVSTKISGLRKDNIATHYRLRVAGNRFQKDWTVSEVANLVLSLDLSDDIDGLLNRWIGRFARKNFPYLIKELTQRGSIEHCNRVFRWMKYQRNYCARNDIYNMMIRLHARHNRTDHARGLFFEMQEWRCKPDVETYNALINAHGRAGQWRWALNIMDDMLRAAIPPSRYTYNNLINACGSSGNWKEALNVCKKMTEHGVGPDLVTHNIILSAFKSGAQYLKALSYFELMKGTHIRPDTTTLNIIIHCLVKLQQYDKAIDIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVDNCEAAFNMMLAEGLKPNIVSYNALIGAYAACGMDNEALLVFNEIKGNGFRPDVVSYTSLLNAYGRSQKPQKAREIFDMMKTNKLKPNLVSYNSLIDAYGSSGFLTDAIEVLREMEQDGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAKMRGIKLNTVAYNSAIGSYMNVGEYEKAINLYKSMRKKKIKTNSVTYTVLISGCCKMSKYCEALSFTKEMMHLKLPLTKELYSSVICAYSKQGQIEEAESTFNLMKSSGCYPDVVTYTSMLDAYSAAGNWEKAYALFEEMEATGIKLDTIACAALMRSFNKGGQPGRVLNLAQSMREKEIPFTDTIFFEMVSACSILQDWRTAVDLIKYIEPSLPVISSGCLNQFLHSLGKSGKIETMLKLFFKMLASGIDVNLNTYSILLKNLLSSGNWRKYLEVLQWMEDAGIHPSNEMYHDISAFSQKCCGHENAAVIKERLESLKRKSEDQISASRPGETPVLS 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01519 828 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 743 777 IPR002885 -
Phco2g01519 828 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 216 250 IPR002885 -
Phco2g01519 828 FunFam Pentatricopeptide repeat-containing protein isoform A 458 564 - -
Phco2g01519 828 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 428 462 IPR002885 -
Phco2g01519 828 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 498 532 IPR002885 -
Phco2g01519 828 FunFam Os07g0213300 protein 263 377 - -
Phco2g01519 828 FunFam Pentatricopeptide repeat-containing protein At2g41720 651 828 - -
Phco2g01519 828 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 533 567 IPR002885 -
Phco2g01519 828 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 358 392 IPR002885 -
Phco2g01519 828 NCBIfam pentatricopeptide repeat 253 287 IPR002885 -
Phco2g01519 828 NCBIfam pentatricopeptide repeat 184 216 IPR002885 -
Phco2g01519 828 NCBIfam pentatricopeptide repeat 218 251 IPR002885 -
Phco2g01519 828 NCBIfam pentatricopeptide repeat 535 565 IPR002885 -
Phco2g01519 828 NCBIfam pentatricopeptide repeat 571 604 IPR002885 -
Phco2g01519 828 NCBIfam pentatricopeptide repeat 430 464 IPR002885 -
Phco2g01519 828 NCBIfam pentatricopeptide repeat 713 743 IPR002885 -
Phco2g01519 828 NCBIfam pentatricopeptide repeat 325 359 IPR002885 -
Phco2g01519 828 NCBIfam pentatricopeptide repeat 500 533 IPR002885 -
Phco2g01519 828 NCBIfam pentatricopeptide repeat 605 639 IPR002885 -
Phco2g01519 828 NCBIfam pentatricopeptide repeat 149 182 IPR002885 -
Phco2g01519 828 NCBIfam pentatricopeptide repeat 395 428 IPR002885 -
Phco2g01519 828 NCBIfam pentatricopeptide repeat 289 320 IPR002885 -
Phco2g01519 828 NCBIfam pentatricopeptide repeat 360 394 IPR002885 -
Phco2g01519 828 Gene3D Tetratricopeptide repeat domain 651 821 IPR011990 GO:0005515
Phco2g01519 828 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 146 180 IPR002885 -
Phco2g01519 828 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 251 285 IPR002885 -
Phco2g01519 828 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 181 215 IPR002885 -
Phco2g01519 828 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL 680 782 - -
Phco2g01519 828 MobiDBLite consensus disorder prediction 809 828 - -
Phco2g01519 828 Gene3D Tetratricopeptide repeat domain 384 457 IPR011990 GO:0005515
Phco2g01519 828 Gene3D Tetratricopeptide repeat domain 244 314 IPR011990 GO:0005515
Phco2g01519 828 Gene3D Tetratricopeptide repeat domain 458 564 IPR011990 GO:0005515
Phco2g01519 828 Gene3D Tetratricopeptide repeat domain 315 383 IPR011990 GO:0005515
Phco2g01519 828 Gene3D Tetratricopeptide repeat domain 565 633 IPR011990 GO:0005515
Phco2g01519 828 Gene3D Tetratricopeptide repeat domain 81 243 IPR011990 GO:0005515
Phco2g01519 828 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 568 602 IPR002885 -
Phco2g01519 828 SUPERFAMILY TPR-like 181 310 IPR011990 GO:0005515
Phco2g01519 828 Pfam PPR repeat family 180 227 IPR002885 -
Phco2g01519 828 Pfam PPR repeat family 572 614 IPR002885 -
Phco2g01519 828 Pfam PPR repeat family 498 546 IPR002885 -
Phco2g01519 828 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 323 357 IPR002885 -
Phco2g01519 828 Pfam Pentatricopeptide repeat domain 446 475 IPR002885 -
Phco2g01519 828 Pfam Pentatricopeptide repeat domain 381 440 IPR002885 -
Phco2g01519 828 Pfam Pentatricopeptide repeat domain 731 779 IPR002885 -
Phco2g01519 828 Pfam Pentatricopeptide repeat domain 321 369 IPR002885 -
Phco2g01519 828 Pfam Pentatricopeptide repeat domain 626 670 IPR002885 -
Phco2g01519 828 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 393 427 IPR002885 -
Phco2g01519 828 SUPERFAMILY TPR-like 286 666 IPR011990 GO:0005515
Phco2g01519 828 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 603 637 IPR002885 -
Phco2g01519 828 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 286 320 IPR002885 -
Phco2g01519 828 FunFam Pentatricopeptide repeat-containing protein At2g41720 84 244 - -
Phco2g01519 828 Pfam PPR repeat 289 316 IPR002885 -
Phco2g01519 828 Pfam PPR repeat 149 178 IPR002885 -