Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01517 ATGGCTTCGTCTTCCTCCGATCCCGGAAAGTCCGCGGAGACGTCGGAAGTGGCGGTGGCAACCGATCAGCTCTTACTCTACCGAGGATTGAAGAAAGCGAAGAAGGAAAGAGGTTGCACTGCCAAAGAGCGCATCAGCAAAATGCCTCCCTGCGCCGCTGGAAAACGCAGCTCAATTTACCGCGGTGTCACCAGGCATAGGTGGACTGGTCGTTATGAAGCGCATCTCTGGGATAAGAGTACGTGGAATCAGAATCAGAATAAGAAGGGAAAACAAGGGGCGTATGATGACGAGGAAGCAGCTGCTAGAGCTTATGATCTTGCTGCTCTCAAATACTGGGGTCCAGGGACTCTCATTAACTTTCCAGTGACTGACTATACAAGAGATCTTGAAGAAATGCAGAATGTGTCGAGAGAAGAGTACCTTGCATCTTTACGGCGGAAGAGCAGTGGTTTTTCTAGAGGACTATCAAAATATCGTGGACTCTCCAGTCGATGGGAATCGTCATATGGCCGCATGTCTGGATCTGATTACTTCAATAGCATGCATTATGGTGCAGGGGATGATTCAGCAGCAGAAAGTGAATATGTCAGTGGTTTCTGCATAGAAAGAAAGATTGATTTAACAAGTCACATCAAATGGTGGGGATCTAATAAGACTCGACATTCTGACTCTGGTACAAGATTATCAGAAGAAAAAAAACTTGGTTCAGCTGGAGATATTTGCAGTGAACTAAAGCAATTGGAACAGAAAGTTCAACCTACAGAACCTTATCAGATGCCACAGTTAGGCAGGCCACACAATGAGAAAAAGCAAAGAAGTTCTTCGGTCTCTGCCTTAAGTATCCTTGCACAATCTGCTGCTTACAAGAGCTTGCAAGAGAAAGCGTCAAAGAGACAGGAAAATAGTATTGATAACGATGAGAATGAAAACAAAAATACAATCAACAAATTGGATCATGGAAAGGCAGTTGAGAAACCATCAAATCATGATGGAGGCAATGATCGGCTTGACATTGCAATGGGAATGAGTGGTACAATGCCTCTTCAAAGAAATGTCTATCCTTTGACACCATTCTTGTCTGCACCACTTTTGACAGCTTACAATACTGTTGATCCAATGGTAGATCCTGTTCTCTGGACGTCTCTTGTTCCCGTACATCCTGCTGGCCTTTCTCGTACGACTGAGGTTACCAAGACAGAGACCAGTTCAACATACACAATGTTTCAGCCAGAGGAATGA 1242 0.4461 MASSSSDPGKSAETSEVAVATDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGLSKYRGLSSRWESSYGRMSGSDYFNSMHYGAGDDSAAESEYVSGFCIERKIDLTSHIKWWGSNKTRHSDSGTRLSEEKKLGSAGDICSELKQLEQKVQPTEPYQMPQLGRPHNEKKQRSSSVSALSILAQSAAYKSLQEKASKRQENSIDNDENENKNTINKLDHGKAVEKPSNHDGGNDRLDIAMGMSGTMPLQRNVYPLTPFLSAPLLTAYNTVDPMVDPVLWTSLVPVHPAGLSRTTEVTKTETSSTYTMFQPEE 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01517 413 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 23 297 - -
Phco2g01517 413 MobiDBLite consensus disorder prediction 252 277 - -
Phco2g01517 413 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Phco2g01517 413 PRINTS Ethylene responsive element binding protein signature 104 124 IPR001471 GO:0003700|GO:0006355
Phco2g01517 413 FunFam AP2-like ethylene-responsive transcription factor 58 124 - -
Phco2g01517 413 SUPERFAMILY DNA-binding domain 58 123 IPR016177 GO:0003677
Phco2g01517 413 Coils Coil 297 317 - -
Phco2g01517 413 MobiDBLite consensus disorder prediction 293 335 - -
Phco2g01517 413 SMART rav1_2 59 128 IPR001471 GO:0003700|GO:0006355
Phco2g01517 413 MobiDBLite consensus disorder prediction 294 333 - -
Phco2g01517 413 Pfam AP2 domain 59 114 IPR001471 GO:0003700|GO:0006355
Phco2g01517 413 Gene3D AP2/ERF domain 59 124 IPR036955 GO:0003700|GO:0006355
Phco2g01517 413 ProSiteProfiles AP2/ERF domain profile. 59 122 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01517 Phco-Chr2 45168363 45171615 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phco2g01517 AP2 2e-09 CL0081