Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phco2g01515 | ATGGAAGCATCAAGTGATAAAGGGTTGTTGTTGGAATGTGGAAGGAAGTGCAGTCCACCTCCATTTTTGTTGAAGACCTACATGCTTGTGGAAGATCCGGCCACCGACGACGTCGTGTCTTGGAATGCCGACGGAACGGCGTTTGTGGTGTGGCAGCCGGCGGAGTTTGCTCGTGATCTCCTCCCAACACTTTTCAAGCACAGCAACTTCTCTAGCTTTGTTCGCCAGCTAAATACTTACGGCTTTCGTAAAGTTGCAACAAGTAGATGGGAGTTTTTCAATGACAGGTTCAAGAAAGGTGAAAGAGAACAGCTATATGAGATTCGGCGAAGAAAAGCTTGGACCAACAAGCAACAACAACCGAATGTACCAAACCAAGCCACACCTCAAGATTCTGATGAAGATCAAAGGTCCTCATCAACTTCATCATCTTCTGGCCACACTACTCTGGTGGATGAAAACAAGAGGCTTAAGAAGGAGAATGGAGTGCTGAACTCTGAGCTCAGAAGCATGAAAAGAAAGTGTAAGGAACTGCTTGATTTGGTGGCCAAATATTCATCAGATGCAAAAGAGAAAGAAGAAGATGAAAGGCCAATGCTGTTTGGAGTGAGGCTAGATGTTGAAGGAGGGAGGGGGATGAAGAGGAATAGAGCTGAGATAAGTGAAAGCGCAAGCATTATGCTGTCTCAGTCATGCAAATAA | 702 | 0.4544 | MEASSDKGLLLECGRKCSPPPFLLKTYMLVEDPATDDVVSWNADGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFFNDRFKKGEREQLYEIRRRKAWTNKQQQPNVPNQATPQDSDEDQRSSSTSSSSGHTTLVDENKRLKKENGVLNSELRSMKRKCKELLDLVAKYSSDAKEKEEDERPMLFGVRLDVEGGRGMKRNRAEISESASIMLSQSCK | 233 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phco2g01515 | 233 | Gene3D | - | 14 | 112 | IPR036388 | - | |
Phco2g01515 | 233 | ProSitePatterns | HSF-type DNA-binding domain signature. | 61 | 85 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Phco2g01515 | 233 | PANTHER | HEAT SHOCK TRANSCRIPTION FACTOR | 18 | 183 | IPR027725 | - | |
Phco2g01515 | 233 | MobiDBLite | consensus disorder prediction | 115 | 150 | - | - | |
Phco2g01515 | 233 | SMART | hsfneu3 | 18 | 111 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Phco2g01515 | 233 | FunFam | Heat stress transcription factor B-4 | 14 | 112 | - | - | |
Phco2g01515 | 233 | Coils | Coil | 154 | 195 | - | - | |
Phco2g01515 | 233 | SUPERFAMILY | "Winged helix" DNA-binding domain | 18 | 111 | IPR036390 | - | |
Phco2g01515 | 233 | MobiDBLite | consensus disorder prediction | 112 | 158 | - | - | |
Phco2g01515 | 233 | Pfam | HSF-type DNA-binding | 22 | 111 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Phco2g01515 | 233 | PRINTS | Heat shock factor (HSF) domain signature | 73 | 85 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Phco2g01515 | 233 | PRINTS | Heat shock factor (HSF) domain signature | 60 | 72 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Phco2g01515 | 233 | PRINTS | Heat shock factor (HSF) domain signature | 22 | 45 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phco2g01515 | Phco-Chr2 | 45080477 | 45082846 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HSF | Phco2g01515 | HSF_DNA-bind | 8.9e-31 | CL0123 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phco2g01515 | 2 | 45080477 | 45082846 | Phco2g01515 | 2 | 45080477 | 45082846 | ECH | |
Phco2g01515 | 2 | 45080477 | 45082846 | Phco6g00298 | 6 | 2913255 | 2916844 | PCT |