Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01513 ATGGGATTGAAGGTACTGACACAGATGCAAGTGACCCTGCTGCTGCTGATTGCGTTCACAAGAATAGGAACTGCAGCAGATGACCAAGCCCTGCCCGGCTGCCCGAACAAGTGCGGAAATGTTTCGATTCCATACCCCTTTGGCGTAGGTGTGTCAGATGTCACGGGAAAGAACTGTTTCTTGGAGAAAAACTTGGAACTCAGCTGCAATGACTCCATTCTATACGCAGGTAACGTCGAAGTTAAGAACATAACCCTCGGAGGTCAAATGGAGATGAATTTCTTCGTCTCCAGTGTCTGCAAAATAAACATTTCTAACGGACAAAAGGAATCCAACACACCCACACTCCAAACTGCATCCTTCACCATTTCCAGCACGGGCAACAAGTTCGTGAGTATAGGCTGCGACACGTACGGGTATCTCAACAGTTACGTCGACCAAGCTAAATACTCAACAGGGTGCTTGACAAGATGTGACAAGAATGAAGCGAATGTGGAAAACATGCAGAGAGATTATGGGAAATGTTCGGGCATAGGGTGCTGCCAGGTGGATATACCTCCTGGAATGAAGAACATCAGTATACAAGCATCCACCTTTGATGATTTCGATTCCTTTTCGAGTCCCAACAGCTGCAGTGTTTCGTTTGTGGTGAAAAATGGCGGGTACAGTTTCAATATGGATCATTTGAAACACATCCCATTCGATAAGGCTCTCATGGTGGTTGATTGGACTGTTGGAGATGGTGCCTGTAACGTTTCCAAGCATACACGTAATGCGTGCACCAGCGATCATAGCGTTTGCGAGGACCCACCCTATGCCAATCGAAGTGGCTACCAATGCAAATGTAAACCAGGGTTTGAGGGCAACCCATACCTTCCCAATGGTTGCACAGACTTTTCGGAATGTAAAACGGGCAAACACAATTGCGCAAGAGCTGAGTATTGTCATGATATTCCTGGCTCTTTTGTATGTTCATGTCCTGATGGACTAATCGGAAATGCAACAAACGAAGGTGGAGGATGCCAACCAAAGCATTCGGCTGATGCATTTACCAAGATCGTCATTGGATCAGGTGTAGGATTAATTGCTCTATTTGTGGGGGTTTCTTGGCTGTACTTGATGCTCCAAAAAAGGAGACTCCTCAAATTGAAGGAAAAGTTCTTTCAGCAGAATGGGGGCATCATTCTAAGACAGAAACTCTCTGCAAGAGAAGAAACGTCTCAATCCGCCACAATTTTCAGTGTTGAGGAACTAAGGAAAGCCACCAACAATTTTGATGAGAGTTTAATCATTGGTAGAGGAGGTTTTGGAACAGTTTTCAAAGGAGTTCTCTCAAATAAAAAAGTTGTGGCCATCAAAAAGTCTAAAATAGTGGACTCGAGCCAAGTGGAGCAATTCGTCAACGAGGTTATTATACTGTCACAAATTAATCACAGGCATGTGGTTAAACTCTTTGGTTGTTGTCTAGAGACAGAAGTTCCTTTATTGGTCTATGAATTTGTTGAAAATGGCACCCTTTTTGATTATTTGCATAAGCAAAGCCAGGTGCCTAATGTAAGTTGGAAAACGCGTCTAAGGATTGCTACAGAAGCAGCTGGAGCTTTGTCATATCTACACTCGGCAGCTTCCATACCCATCATCCACAGAGATGTGAAAACTGCTAACATACTCTTAGATGAAACTAACACAGCCAAAGTGTCTGACTTTGGAGCTTCACGATTGGTTCCACTTGACCAAACTGAAATAGCCACAATTGTGCAAGGAACCTTTGGCTATTTAGACCCAGAGTACATGCAATCAGGCCAATTGACTGAAAAAAGCGATGTCTATAGCTTTGGGGTAGTACTTGTAGAACTTCTAACTGGGAAGGAACCTTTCTCTTTTAGCAAGACAGAAGACAAACGAAGTCTTACACTTCATTTTCTTAGTAGCTTGGAAGAGGATTACCTGATTGATGTTCTTCAGAATGATATTCTGGATGAAGAAAATAAGCAGGAGATTATGGAGGTTGCCATTCTGGCTGCCAGGTGCTTGAAACTTAGAGGGGAGGAAAGGCCTACCATGAAGGAAGTGACAATGGAATTGGAGGGAATAAGGCATATGGACAAACACCATTGGATCAATACAAGCCAAAATTTTGAGGAGAGTCAATACTTGCTTTCTGAGGCACAAAGCACTCGTGAACATGGTGACAGTAGTGGCCAACAAAACACTGGATTTGATAGCTTGCGAGAACTTCAATTAATTGACTTTGGTAATGGGAGATGA 2268 0.4347 MGLKVLTQMQVTLLLLIAFTRIGTAADDQALPGCPNKCGNVSIPYPFGVGVSDVTGKNCFLEKNLELSCNDSILYAGNVEVKNITLGGQMEMNFFVSSVCKINISNGQKESNTPTLQTASFTISSTGNKFVSIGCDTYGYLNSYVDQAKYSTGCLTRCDKNEANVENMQRDYGKCSGIGCCQVDIPPGMKNISIQASTFDDFDSFSSPNSCSVSFVVKNGGYSFNMDHLKHIPFDKALMVVDWTVGDGACNVSKHTRNACTSDHSVCEDPPYANRSGYQCKCKPGFEGNPYLPNGCTDFSECKTGKHNCARAEYCHDIPGSFVCSCPDGLIGNATNEGGGCQPKHSADAFTKIVIGSGVGLIALFVGVSWLYLMLQKRRLLKLKEKFFQQNGGIILRQKLSAREETSQSATIFSVEELRKATNNFDESLIIGRGGFGTVFKGVLSNKKVVAIKKSKIVDSSQVEQFVNEVIILSQINHRHVVKLFGCCLETEVPLLVYEFVENGTLFDYLHKQSQVPNVSWKTRLRIATEAAGALSYLHSAASIPIIHRDVKTANILLDETNTAKVSDFGASRLVPLDQTEIATIVQGTFGYLDPEYMQSGQLTEKSDVYSFGVVLVELLTGKEPFSFSKTEDKRSLTLHFLSSLEEDYLIDVLQNDILDEENKQEIMEVAILAARCLKLRGEERPTMKEVTMELEGIRHMDKHHWINTSQNFEESQYLLSEAQSTREHGDSSGQQNTGFDSLRELQLIDFGNGR 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01513 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672|GO:0006468
Phco2g01513 755 SMART egf_5 301 342 IPR000742 -
Phco2g01513 755 SMART egf_5 249 297 IPR000742 -
Phco2g01513 755 ProSiteProfiles Protein kinase domain profile. 425 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01513 755 SMART serkin_6 425 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01513 755 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 707 IPR045274 GO:0007166
Phco2g01513 755 Gene3D Transferase(Phosphotransferase) domain 1 501 723 - -
Phco2g01513 755 Pfam Calcium-binding EGF domain 298 331 IPR001881 GO:0005509
Phco2g01513 755 SUPERFAMILY EGF/Laminin 298 333 - -
Phco2g01513 755 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 315 326 IPR000152 -
Phco2g01513 755 SMART egfca_6 298 342 IPR001881 GO:0005509
Phco2g01513 755 FunFam Wall-associated receptor kinase 2 395 500 - -
Phco2g01513 755 CDD EGF_CA 298 332 - -
Phco2g01513 755 Pfam Protein kinase domain 429 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01513 755 SUPERFAMILY Protein kinase-like (PK-like) 404 696 IPR011009 -
Phco2g01513 755 Gene3D Laminin 250 340 - -
Phco2g01513 755 FunFam Wall-associated receptor kinase 2 501 718 - -
Phco2g01513 755 CDD STKc_IRAK 431 698 - -
Phco2g01513 755 Gene3D Phosphorylase Kinase; domain 1 391 500 - -
Phco2g01513 755 FunFam Fibrillin 2 293 337 - -
Phco2g01513 755 Pfam Wall-associated receptor kinase galacturonan-binding 34 89 IPR025287 GO:0030247
Phco2g01513 755 ProSitePatterns Protein kinases ATP-binding region signature. 431 454 IPR017441 GO:0005524
Phco2g01513 755 MobiDBLite consensus disorder prediction 720 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01513 Phco-Chr2 45037961 45040443 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phco2g01513 Pkinase 9.5e-52 CL0016